myRT

myRT report for GCA_009782875.1_ASM978287v1

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Seq: WRIE01000002.1 Eubacteriaceae bacterium isolate Nt197P3bin28 Ga0082212_10000185, whole genome shotgun sequence (92389 bp)
Overview 1 RT 1: 84784-90087 bp Neighborhood of RT #1 [84784, 90140] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Cmr6_III-B Cas_Cmr5 Feature: gene Location: 84784-85071 bp Feature: domain Description: Cas2_I_II_III Location: 84793-85033 bp Feature: domain Description: Cas2_I_II_III Location: 84793-85033 bp Feature: gene Location: 85055-86020 bp Feature: domain Description: Cas1_I-II-III Location: 85058-85979 bp Feature: domain Description: Cas1 _I-II-III Location: 85058-85979 bp Feature: gene Location: 86041-88929 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 86254-86848 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 86254-86848 bp Feature: gene Location: 88985-89734 bp Feature: domain Description: Cmr6_III-B Location: 89099-89708 bp Feature: domain Description: Cmr6_III-B Location: 89099-89708 bp Feature: gene Location: 89727-90140 bp Feature: domain Description: Cas_Cmr5 Location: 89763-90087 bp Feature: domain Description: Cas_Cmr5 Location: 89763-90087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: WRIE01000009.1 Eubacteriaceae bacterium isolate Nt197P3bin28 Ga0082212_10000388, whole genome shotgun sequence (64272 bp)
Overview 1 RT 1: 36841-41145 bp Neighborhood of RT #1 [36841, 41156] MFS_2 RVT-GII PRK00098 Feature: gene Location: 36841-38244 bp Feature: domain Description: MFS_2 Location: 36904-38164 bp Feature: domain Description: MFS_2 Location: 36904-38164 bp Feature: gene Location: 38445-38684 bp Feature: gene Location: 39026-39757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39350-39734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39350-39734 bp Feature: gene Location: 39977-40276 bp Feature: gene Location: 40290-41156 bp Feature: domain Description: PRK00098 Location: 40296-41145 bp Feature: domain Description: PRK00098 Location: 402 96-41145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_2 (pfam13347), RVT-GII, PRK00098 (GTPase RsgA; Reviewed)

Seq: WRIE01000036.1 Eubacteriaceae bacterium isolate Nt197P3bin28 Ga0082212_10001526, whole genome shotgun sequence (34187 bp)
Overview 1 RT 1: 27864-31968 bp Neighborhood of RT #1 [27864, 31976] RVT-GII GIIM COG5421 YoeB_toxin Feature: gene Location: 27864-28037 bp Feature: gene Location: 28107-28259 bp Feature: gene Location: 28371-29774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28695-29316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28695-293 16 bp Feature: domain Description: GIIM Note: maturase Location: 29370-29580 bp Feature: domain Description: GIIM Note: maturase Location: 293 70-29580 bp Feature: gene Location: 30045-31688 bp Feature: domain Description: COG5421 Location: 30306-31473 bp Feature: domain Description: COG5421 Location: 3 03 06-3 1473 bp Feature: gene Location: 31782-31976 bp Feature: domain Description: YoeB_toxin Location: 31785-31968 bp Feature: domain Description: YoeB_toxin Location: 3 1785-3 1968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase ), YoeB_toxin (pfam06769)

Seq: WRIE01000038.1 Eubacteriaceae bacterium isolate Nt197P3bin28 Ga0082212_10001689, whole genome shotgun sequence (32481 bp)
Overview 1 RT 1: 8010-11507 bp Neighborhood of RT #1 [8010, 11545] RVT-GII Intron_maturas2 PGRP Feature: gene Location: 8010-8171 bp Feature: gene Location: 8836-9141 bp Feature: gene Location: 9339-10685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9603-10176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9603-10176 bp Feature: domain Description: Intron_maturas2 Location: 10215-10494 bp Feature: domain Description: Intron_maturas2 Location: 10215-104 94 bp Feature: gene Location: 10839-11006 bp Feature: gene Location: 11102-11545 bp Feature: domain Description: PGRP Location: 11177-11507 bp Feature: domain Description: PGRP Location: 11177-11507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), PGRP (smart00701)

Seq: WRIE01000042.1 Eubacteriaceae bacterium isolate Nt197P3bin28 Ga0082212_10002008, whole genome shotgun sequence (29917 bp)
Overview 1 RT 1: 6719-13825 bp Neighborhood of RT #1 [6719, 13825] PRK09362 RVT-Retrons Feature: gene Location: 6719-7405 bp Feature: domain Description: PRK09362 Location: 6725-7355 bp Feature: domain Description: PRK09362 Location: 6725 -735 5 bp Feature: gene Location: 7490-7720 bp Feature: gene Location: 7767-9230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8382-9006 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8382-9006 bp Feature: gene Location: 9243-10997 bp Feature: gene Location: 10988-13825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-Retrons