myRT

myRT report for GCA_009785875.1_ASM978587v1

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Seq: WQUF01000006.1 Ruminococcaceae bacterium isolate Cu122P5bin16 JGI20166J26741_10017939, whole genome shotgun sequence (2831 bp)
Overview 1 RT 1: 410-2564 bp Neighborhood of RT #1 [410, 2564] RVT-GII Feature: gene Location: 410-1171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-620 bp Feature: gene Location: 1512-1841 bp Feature: gene Location: 1959-2564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WQUF01000008.1 Ruminococcaceae bacterium isolate Cu122P5bin16 JGI20166J26741_10022772, whole genome shotgun sequence (2825 bp)
Overview 1 RT 1: 780-1593 bp Neighborhood of RT #1 [780, 1593] RVT-GII Feature: gene Location: 780-986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-984 bp Feature: gene Location: 1225-1593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WQUF01000053.1 Ruminococcaceae bacterium isolate Cu122P5bin16 JGI20166J26741_10217493, whole genome shotgun sequence (2593 bp)
Overview 1 RT 1: 181-2591 bp Neighborhood of RT #1 [181, 2591] RVT-GII Feature: gene Location: 181-357 bp Feature: gene Location: 631-999 bp Feature: gene Location: 987-1508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023 -1200 bp Feature: gene Location: 1671-1853 bp Feature: gene Location: 2193-2591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WQUF01000065.1 Ruminococcaceae bacterium isolate Cu122P5bin16 JGI20166J26741_10252104, whole genome shotgun sequence (2558 bp)
Overview 1 RT 1: 1409-2557 bp Neighborhood of RT #1 [1409, 2556] RVT-CRISPR Cas_Cas1 Feature: gene Location: 1409-1540 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1418-1535 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 14 18-1535 bp Feature: gene Location: 1864-2556 bp Feature: domain Description: Cas_Cas1 Location: 1873-2557 bp Feature: domain Description: Cas_Cas1 Location: 1873-2557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: WQUF01000177.1 Ruminococcaceae bacterium isolate Cu122P5bin16 JGI20166J26741_11459807, whole genome shotgun sequence (13337 bp)
Overview 1 RT 1: 3-2472 bp Neighborhood of RT #1 [3, 2472] RVT-Retrons PIN Feature: gene Location: 3-1334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372-996 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372-996 bp Feature: gene Location: 1321-1749 bp Feature: domain Description: PIN Location: 1342-1711 bp Feature: domain Description: PIN Location: 1342-1711 bp Feature: gene Location: 1918-2472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PIN (pfam01850)