myRT

myRT report for GCA_009790015.1_ASM979001v1

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Seq: WSVE01000133.1 Escherichia coli strain SH4c NODE_133_length_2732_cov_1.178503, whole genome shotgun sequence (2732 bp)
Overview 1 RT 1: 180-1934 bp Neighborhood of RT #1 [180, 1934] RVT-GII GIIM Feature: gene Location: 180-1430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-1041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-1 041 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1344 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 22-1 344 bp Feature: gene Location: 1418-1741 bp Feature: gene Location: 1794-1934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WSVE01000051.1 Escherichia coli strain SH4c NODE_51_length_31419_cov_1.408858, whole genome shotgun sequence (31419 bp)
Overview 1 RT 1: 17467-21750 bp Neighborhood of RT #1 [17467, 21758] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 17467-18372 bp Feature: gene Location: 18630-18827 bp Feature: gene Location: 18858-19397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19188-19266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19188-192 66 bp Feature: gene Location: 19425-19946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19431-19713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19431-19713 bp Feature: domain Description: GIIM Note: maturase Location: 19761-19941 bp Feature: domain Description: GIIM Note: maturase Location: 19761-19941 bp Feature: gene Location: 20268-20456 bp Feature: gene Location: 20496-21758 bp Feature: domain Description: YesM Location: 21009-21750 bp Feature: domain Description: YesM Location: 2 1009-2 1750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: WSVE01000054.1 Escherichia coli strain SH4c NODE_54_length_30518_cov_3.089434, whole genome shotgun sequence (30518 bp)
Overview 1 RT 1: 25532-28350 bp Neighborhood of RT #1 [25532, 28382] Phage_integrase RVT-GII cupin_WbuC PRK15442 Feature: gene Location: 25532-25945 bp Feature: gene Location: 25845-26726 bp Feature: domain Description: Phage_integrase Location: 26070-26643 bp Feature: domain Description: Phage_integrase Location: 26070-26643 bp Feature: gene Location: 26770-27036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26779-27025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26779-27025 bp Feature: gene Location: 27188-27460 bp Feature: domain Description: cupin_WbuC Location: 27194-27380 bp Feature: domain Description: cupin_WbuC Location: 27194-273 80 bp Feature: gene Location: 27507-28382 bp Feature: domain Description: PRK15442 Location: 27576-28350 bp Feature: domain Description: PRK15442 Location: 27576-283 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-GII, cupin_WbuC (TIGR04366), PRK15442 (beta-lactamase TEM; Provisional)