myRT

myRT report for GCA_009790115.1_ASM979011v1

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Seq: WSVJ01000100.1 Escherichia coli strain R6cA NODE_100_length_8886_cov_20.392739, whole genome shotgun sequence (8886 bp)
Overview 1 RT 1: 224-3639 bp Neighborhood of RT #1 [224, 3644] Tra5 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 224-655 bp Feature: domain Description: Tra5 Location: 230-647 bp Feature: domain Description: Tra5 Location: 230-647 bp Feature: gene Location: 766-996 bp Feature: gene Location: 1048-2289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1321-2053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 321 -2053 bp Feature: domain Description: GIIM Note: maturase Location: 2128-2284 bp Feature: domain Description: GIIM Note: maturase Location: 21 28-2284 bp Feature: gene Location: 2881-3348 bp Feature: domain Description: PHA02517 Location: 2947-3286 bp Feature: domain Description: PHA0251 7 Location: 2947-3286 bp Feature: gene Location: 3345-3644 bp Feature: domain Description: InsE Location: 3375-3639 bp Feature: domain Description: InsE Location: 3375-3639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: WSVJ01000041.1 Escherichia coli strain R6cA NODE_41_length_48999_cov_17.038181, whole genome shotgun sequence (48999 bp)
Overview 1 RT 1: 17410-23441 bp Neighborhood of RT #1 [17410, 23441] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 17410-18330 bp Feature: domain Description: AbiEii Location: 17452-18193 bp Feature: domain Description: AbiEii Location: 17452 -18193 bp Feature: gene Location: 18317-19120 bp Feature: domain Description: AbiEi_3_N Location: 18350-18611 bp Feature: domain Description: AbiEi_3_N Location: 18350-18611 bp Feature: domain Description: AbiEi_3 Location: 18623-19079 bp Feature: domain Description: AbiEi_3 Location: 1862 3-19079 bp Feature: gene Location: 19415-22624 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 19943-20432 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 19943-2 0432 bp Feature: domain Description: nitrilase Location: 21938-22535 bp Feature: domain Description: nitrilase Location: 2 1938-2 2 535 bp Feature: gene Location: 22785-22925 bp Feature: domain Description: Phage_ASH Location: 22812-22905 bp Feature: domain Description: Phage_ASH Location: 2 2 812 -2 2 905 bp Feature: gene Location: 22971-23441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)