myRT

myRT report for GCA_009790195.1_ASM979019v1

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Seq: WSVN01000014.1 Escherichia coli strain OM35c NODE_14_length_106763_cov_32.135808, whole genome shotgun sequence (106763 bp)
Overview 1 RT 1: 46488-54213 bp Neighborhood of RT #1 [46488, 54752] prfC SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N 7tmA_amine_R-like Collar Feature: gene Location: 46488-48074 bp Feature: domain Description: prfC Location: 46506-48072 bp Feature: domain Description: prfC Location: 46506-48072 bp Feature: gene Location: 48605-49309 bp Feature: domain Description: SLATT_5 Location: 48767-49277 bp Feature: domain Description: SLATT_5 Location: 48767-49277 bp Feature: gene Location: 49287-50657 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 49515-50121 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4951 5-501 21 bp Feature: gene Location: 50770-51354 bp Feature: domain Description: Caudo_TAP Location: 50986-51343 bp Feature: domain Description: Caudo_TAP Location: 50986-51 343 bp Feature: gene Location: 51354-54752 bp Feature: domain Description: phage_tail_N Location: 51357-51756 bp Feature: domain Description: phage_tail_N Location: 51 357-51 756 bp Feature: domain Description: 7tmA_amine_R-like Location: 52263-52680 bp Feature: domain Description: 7tmA_amine_R-like Location: 52263-52680 bp Feature: domain Description: Collar Location: 54075-54213 bp Feature: domain Description: Collar Location: 54075-5421 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Collar (pfam07484)

Seq: WSVN01000052.1 Escherichia coli strain OM35c NODE_52_length_15000_cov_32.962684, whole genome shotgun sequence (15000 bp)
Overview 1 RT 1: 4399-7288 bp Neighborhood of RT #1 [4399, 7288] RVT-GII GIIM RVT-GII Feature: gene Location: 4399-4617 bp Feature: gene Location: 4660-4830 bp Feature: gene Location: 4993-5646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4996-5404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4996-5404 bp Feature: domain Description: GIIM Note: maturase Location: 5452-5644 bp Feature: domain Description: GIIM Note: maturase Location: 5452 -5644 bp Feature: gene Location: 5619-6053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5811-6027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5811-602 7 bp Feature: gene Location: 6222-6419 bp Feature: gene Location: 6962-7288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)