myRT

myRT report for GCA_009790265.1_ASM979026v1

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Seq: WSVQ01000100.1 Escherichia coli strain OM29c NODE_100_length_12644_cov_3.541264, whole genome shotgun sequence (12644 bp)
Overview 1 RT 1: 9523-12577 bp Neighborhood of RT #1 [9523, 12642] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 9523-9708 bp Feature: gene Location: 9797-10237 bp Feature: domain Description: PHA02517 Location: 9800-10208 bp Feature: domain Description: PHA0251 7 Location: 9800-1 0208 bp Feature: gene Location: 10366-11889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10639-11371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0639-1 1 371 bp Feature: domain Description: GIIM Note: maturase Location: 11446-11644 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 446-1 1 644 bp Feature: gene Location: 11843-12268 bp Feature: gene Location: 12481-12642 bp Feature: domain Description: PHA02517 Location: 12484-12577 bp Feature: domain Description: PHA0251 7 Location: 1 2484-1 2577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WSVQ01000152.1 Escherichia coli strain OM29c NODE_152_length_4794_cov_0.934219, whole genome shotgun sequence (4794 bp)
Overview 1 RT 1: 982-4373 bp Neighborhood of RT #1 [982, 4780] TraD PRK13889 RVT-Retrons Feature: gene Location: 982-1293 bp Feature: domain Description: TraD Location: 1096-1270 bp Feature: domain Description: TraD Location: 1096-12 70 bp Feature: gene Location: 2101-3603 bp Feature: domain Description: PRK13889 Location: 2104-2683 bp Feature: domain Description: PRK13889 Location: 2 104-2 683 bp Feature: gene Location: 3680-4780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3821-4373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 382 1-4373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, TraD (pfam06412)