myRT

myRT report for GCA_009790285.1_ASM979028v1

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Seq: WSVS01000014.1 Escherichia coli strain OM24c NODE_14_length_138167_cov_17.105085, whole genome shotgun sequence (138167 bp)
Overview 1 RT 1: 22383-28626 bp Neighborhood of RT #1 [22383, 28763] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22383-22649 bp Feature: domain Description: Phage_integrase Location: 22449-22545 bp Feature: domain Description: Phage_integrase Location: 22449-22545 bp Feature: gene Location: 22732-23202 bp Feature: gene Location: 23549-26758 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24077-24566 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24077-24566 bp Feature: domain Description: nitrilase Location: 26072-26669 bp Feature: domain Description: nitrilase Location: 26072-26669 bp Feature: gene Location: 27053-27856 bp Feature: domain Description: AbiEi_3_N Location: 27086-27347 bp Feature: domain Description: AbiEi_3_N Location: 27086-27347 bp Feature: domain Description: AbiEi_3 Location: 27359-27815 bp Feature: domain Description: AbiEi_3 Location: 27359-2781 5 bp Feature: gene Location: 27843-28763 bp Feature: domain Description: AbiEii Location: 27885-28626 bp Feature: domain Description: AbiEii Location: 27885-28626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: WSVS01000064.1 Escherichia coli strain OM24c NODE_64_length_18703_cov_19.227175, whole genome shotgun sequence (18703 bp)
Overview 1 RT 1: 3660-7072 bp Neighborhood of RT #1 [3660, 7080] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 3660-3959 bp Feature: domain Description: InsE Location: 3690-3954 bp Feature: domain Description: InsE Location: 3690-3954 bp Feature: gene Location: 3956-4423 bp Feature: domain Description: PHA02517 Location: 4022-4361 bp Feature: domain Description: PHA02 517 Location: 402 2 -4361 bp Feature: gene Location: 5015-6256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5288-6020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 88-602 0 bp Feature: domain Description: GIIM Note: maturase Location: 6095-6251 bp Feature: domain Description: GIIM Note: maturase Location: 6095-62 51 bp Feature: gene Location: 6308-6538 bp Feature: gene Location: 6649-7080 bp Feature: domain Description: Tra5 Location: 6655-7072 bp Feature: domain Description: Tra5 Location: 6655-7072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)