myRT

myRT report for GCA_009790475.1_ASM979047v1

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Seq: WSWA01000026.1 Escherichia coli strain OM14c NODE_26_length_71175_cov_15.167366, whole genome shotgun sequence (71175 bp)
Overview 1 RT 1: 3378-9011 bp Neighborhood of RT #1 [3378, 9064] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 3378-3743 bp Feature: gene Location: 4391-5884 bp Feature: domain Description: PRK13889 Location: 4394-4994 bp Feature: domain Description: PRK1 3889 Location: 4394-4994 bp Feature: gene Location: 6022-7506 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 6385-6793 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 6385-6793 bp Feature: gene Location: 7635-8168 bp Feature: gene Location: 8576-9064 bp Feature: domain Description: DUF4755 Location: 8708-9011 bp Feature: domain Description: DUF4755 Location: 8708-901 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: WSWA01000029.1 Escherichia coli strain OM14c NODE_29_length_50909_cov_16.954846, whole genome shotgun sequence (50909 bp)
Overview 1 RT 1: 36724-40950 bp Neighborhood of RT #1 [36724, 41048] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI YhhI Feature: gene Location: 36724-37683 bp Feature: domain Description: YhhI Location: 36730-37075 bp Feature: domain Description: YhhI Location: 36730-37075 bp Feature: domain Description: YhhI Location: 37132-37486 bp Feature: domain Description: YhhI Location: 37132 -37486 bp Feature: domain Description: YhhI Location: 37486-37666 bp Feature: domain Description: YhhI Location: 37486-37666 bp Feature: gene Location: 37711-37851 bp Feature: gene Location: 38215-39465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38419-39076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38419-39076 bp Feature: domain Description: GIIM Note: maturase Location: 39157-39379 bp Feature: domain Description: GIIM Note: maturase Location: 39157-39379 bp Feature: gene Location: 39476-39736 bp Feature: domain Description: YhhI Location: 39551-39722 bp Feature: domain Description: YhhI Location: 39551-3972 2 bp Feature: gene Location: 39912-41048 bp Feature: domain Description: YhhI Location: 39915-40278 bp Feature: domain Description: YhhI Location: 39915-402 78 bp Feature: domain Description: YhhI Location: 40335-40689 bp Feature: domain Description: YhhI Location: 40335-40689 bp Feature: domain Description: YhhI Location: 40707-40950 bp Feature: domain Description: YhhI Location: 40707-40950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)