myRT

myRT report for GCA_009790585.1_ASM979058v1

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Seq: WSWH01000043.1 Escherichia coli strain OM5c NODE_43_length_27357_cov_13.780867, whole genome shotgun sequence (27357 bp)
Overview 1 RT 1: 3-4182 bp Neighborhood of RT #1 [3, 4182] RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 3-1262 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 576-1029 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 576-1 029 bp Feature: gene Location: 1253-2614 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1625-2120 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 625-21 20 bp Feature: gene Location: 3149-3421 bp Feature: domain Description: PRK09678 Location: 3158-3314 bp Feature: domain Description: PRK09678 Location: 31 58-331 4 bp Feature: gene Location: 3421-4182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: WSWH01000061.1 Escherichia coli strain OM5c NODE_61_length_10983_cov_15.584285, whole genome shotgun sequence (10983 bp)
Overview 1 RT 1: 7036-10980 bp Neighborhood of RT #1 [7036, 10982] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 7036-7995 bp Feature: domain Description: YhhI Location: 7042-7387 bp Feature: domain Description: YhhI Location: 7042 -7387 bp Feature: domain Description: YhhI Location: 7444-7798 bp Feature: domain Description: YhhI Location: 7444-7798 bp Feature: domain Description: YhhI Location: 7798-7978 bp Feature: domain Description: YhhI Location: 7798-7978 bp Feature: gene Location: 8023-8163 bp Feature: gene Location: 8527-9777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8731-9388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8731-9388 bp Feature: domain Description: GIIM Note: maturase Location: 9469-9691 bp Feature: domain Description: GIIM Note: maturase Location: 9469-9691 bp Feature: gene Location: 9788-10048 bp Feature: domain Description: YhhI Location: 9863-10034 bp Feature: domain Description: YhhI Location: 9863-10034 bp Feature: gene Location: 10224-10982 bp Feature: domain Description: YhhI Location: 10227-10590 bp Feature: domain Description: YhhI Location: 102 2 7-10590 bp Feature: domain Description: YhhI Location: 10647-10980 bp Feature: domain Description: YhhI Location: 10647-10980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)