myRT

myRT report for GCA_009790625.1_ASM979062v1

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Seq: WSWJ01000027.1 Escherichia coli strain OM2c NODE_27_length_56197_cov_1.719993, whole genome shotgun sequence (56197 bp)
Overview 1 RT 1: 27775-30797 bp Neighborhood of RT #1 [27775, 30797] RVT-GII RVT-GII GIIM Feature: gene Location: 27775-28680 bp Feature: gene Location: 28818-29009 bp Feature: gene Location: 29166-29705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29496-29574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29496-29574 bp Feature: gene Location: 29733-30254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29739-30021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29739-30021 bp Feature: domain Description: GIIM Note: maturase Location: 30069-30249 bp Feature: domain Description: GIIM Note: maturase Location: 30069-30249 bp Feature: gene Location: 30353-30499 bp Feature: gene Location: 30609-30797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WSWJ01000006.1 Escherichia coli strain OM2c NODE_6_length_137388_cov_1.457472, whole genome shotgun sequence (137388 bp)
Overview 1 RT 1: 22296-28539 bp Neighborhood of RT #1 [22296, 28676] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22296-22562 bp Feature: domain Description: Phage_integrase Location: 22362-22458 bp Feature: domain Description: Phage_integrase Location: 2 2 362 -2 2 458 bp Feature: gene Location: 22645-23115 bp Feature: gene Location: 23462-26671 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23990-24479 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3990-2 4479 bp Feature: domain Description: nitrilase Location: 25985-26582 bp Feature: domain Description: nitrilase Location: 2 5985-2 6582 bp Feature: gene Location: 26966-27769 bp Feature: domain Description: AbiEi_3_N Location: 26999-27260 bp Feature: domain Description: AbiEi_3_N Location: 2 6999-2 72 60 bp Feature: domain Description: AbiEi_3 Location: 27272-27728 bp Feature: domain Description: AbiEi_3 Location: 2 72 72 -2 772 8 bp Feature: gene Location: 27756-28676 bp Feature: domain Description: AbiEii Location: 27798-28539 bp Feature: domain Description: AbiEii Location: 2 7798-2 8539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)