myRT

myRT report for GCA_009790745.1_ASM979074v1

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Seq: WSWP01000033.1 Escherichia coli strain IM33c NODE_33_length_42470_cov_25.432586, whole genome shotgun sequence (42470 bp)
Overview 1 RT 1: 521-4155 bp Neighborhood of RT #1 [521, 4181] RVT-GII PRK10276 Feature: gene Location: 521-877 bp Feature: gene Location: 1027-1644 bp Feature: gene Location: 1858-3345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2263-2953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2263-2953 bp Feature: gene Location: 3370-3744 bp Feature: gene Location: 3747-4181 bp Feature: domain Description: PRK10276 Location: 3795-4155 bp Feature: domain Description: PRK1 0276 Location: 3795-41 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: WSWP01000007.1 Escherichia coli strain IM33c NODE_7_length_166262_cov_21.756529, whole genome shotgun sequence (166262 bp)
Overview 1 RT 1: 137500-143531 bp Neighborhood of RT #1 [137500, 143531] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137500-138420 bp Feature: domain Description: AbiEii Location: 137542-138283 bp Feature: domain Description: AbiEii Location: 137542 -1382 83 bp Feature: gene Location: 138407-139210 bp Feature: domain Description: AbiEi_3_N Location: 138440-138701 bp Feature: domain Description: AbiEi_3_N Location: 138440-138701 bp Feature: domain Description: AbiEi_3 Location: 138713-139169 bp Feature: domain Description: AbiEi_3 Location: 138713-139169 bp Feature: gene Location: 139505-142714 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140033-140522 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140033-14052 2 bp Feature: domain Description: nitrilase Location: 142028-142625 bp Feature: domain Description: nitrilase Location: 142 02 8-142 62 5 bp Feature: gene Location: 142875-143015 bp Feature: domain Description: Phage_ASH Location: 142902-142995 bp Feature: domain Description: Phage_ASH Location: 142 902 -142 995 bp Feature: gene Location: 143061-143531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: WSWP01000083.1 Escherichia coli strain IM33c NODE_83_length_2365_cov_107.867292, whole genome shotgun sequence (2365 bp)
Overview 1 RT 1: 16-1959 bp Neighborhood of RT #1 [16, 2204] RVT-GII GIIM Feature: gene Location: 16-387 bp Feature: gene Location: 681-2204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)