myRT

myRT report for GCA_009790825.1_ASM979082v1

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Seq: WSWS01000015.1 Escherichia coli strain IM24c NODE_15_length_131505_cov_29.779255, whole genome shotgun sequence (131505 bp)
Overview 1 RT 1: 22383-28626 bp Neighborhood of RT #1 [22383, 28763] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22383-22649 bp Feature: domain Description: Phage_integrase Location: 22449-22545 bp Feature: domain Description: Phage_integrase Location: 22449-22545 bp Feature: gene Location: 22732-23202 bp Feature: gene Location: 23549-26758 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24077-24566 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24077-24566 bp Feature: domain Description: nitrilase Location: 26072-26669 bp Feature: domain Description: nitrilase Location: 26072-26669 bp Feature: gene Location: 27053-27856 bp Feature: domain Description: AbiEi_3_N Location: 27086-27347 bp Feature: domain Description: AbiEi_3_N Location: 27086-27347 bp Feature: domain Description: AbiEi_3 Location: 27359-27815 bp Feature: domain Description: AbiEi_3 Location: 27359-2781 5 bp Feature: gene Location: 27843-28763 bp Feature: domain Description: AbiEii Location: 27885-28626 bp Feature: domain Description: AbiEii Location: 27885-28626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: WSWS01000009.1 Escherichia coli strain IM24c NODE_9_length_201403_cov_31.430036, whole genome shotgun sequence (201403 bp)
Overview 1 RT 1: 171081-174113 bp Neighborhood of RT #1 [171081, 174113] RVT-GII GIIM RVT-GII Feature: gene Location: 171081-171251 bp Feature: gene Location: 171389-171535 bp Feature: gene Location: 171634-172155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171640-171922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171640-17192 2 bp Feature: domain Description: GIIM Note: maturase Location: 171970-172150 bp Feature: domain Description: GIIM Note: maturase Location: 171970-172 150 bp Feature: gene Location: 172183-172722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172513-172591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 513-172 591 bp Feature: gene Location: 172753-172950 bp Feature: gene Location: 173208-174113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)