myRT

myRT report for GCA_009790925.1_ASM979092v1

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Seq: WSWX01000162.1 Escherichia coli strain IM13c NODE_162_length_706_cov_39.043178, whole genome shotgun sequence (706 bp)
Overview 1 RT 1: 3-390 bp Neighborhood of RT #1 [3, 614] RVT-GII GIIM Feature: gene Location: 3-614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-96 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5-96 bp Feature: domain Description: GIIM Note: maturase Location: 171-390 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 -390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WSWX01000072.1 Escherichia coli strain IM13c NODE_72_length_16500_cov_20.047639, whole genome shotgun sequence (16500 bp)
Overview 1 RT 1: 3-1383 bp Neighborhood of RT #1 [3, 1448] RVT-GII PHA02517 Feature: gene Location: 3-431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76-432 bp Feature: gene Location: 385-810 bp Feature: gene Location: 1023-1448 bp Feature: domain Description: PHA02517 Location: 1044-1383 bp Feature: domain Description: PHA02 517 Location: 1044-1383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: WSWX01000087.1 Escherichia coli strain IM13c NODE_87_length_9679_cov_23.904104, whole genome shotgun sequence (9679 bp)
Overview 1 RT 1: 208-5544 bp Neighborhood of RT #1 [208, 5648] RVT-UG5 YeeA YeeA Feature: gene Location: 208-3210 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 670-1159 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 670-1159 bp Feature: gene Location: 3227-3691 bp Feature: gene Location: 3714-5648 bp Feature: domain Description: YeeA Location: 4353-5064 bp Feature: domain Description: YeeA Location: 43 53 -5064 bp Feature: domain Description: YeeA Location: 5220-5544 bp Feature: domain Description: YeeA Location: 5220-5544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, YeeA (COG1002)