myRT

myRT report for GCA_009791025.1_ASM979102v1

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Seq: WSXE01000027.1 Escherichia coli strain IH38c NODE_27_length_57807_cov_2.105617, whole genome shotgun sequence (57807 bp)
Overview 1 RT 1: 29844-32866 bp Neighborhood of RT #1 [29844, 32866] RVT-GII RVT-GII GIIM Feature: gene Location: 29844-30749 bp Feature: gene Location: 31007-31204 bp Feature: gene Location: 31235-31774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31565-31643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 565-31 643 bp Feature: gene Location: 31802-32323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31808-32090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 808-32090 bp Feature: domain Description: GIIM Note: maturase Location: 32138-32318 bp Feature: domain Description: GIIM Note: maturase Location: 321 38-3231 8 bp Feature: gene Location: 32422-32568 bp Feature: gene Location: 32678-32866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WSXE01000044.1 Escherichia coli strain IH38c NODE_44_length_35063_cov_1.772355, whole genome shotgun sequence (35063 bp)
Overview 1 RT 1: 20800-28501 bp Neighborhood of RT #1 [20800, 28638] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 20800-22053 bp Feature: domain Description: proA Location: 20827-22018 bp Feature: domain Description: proA Location: 2 082 7-2 2 018 bp Feature: gene Location: 22607-23077 bp Feature: gene Location: 23424-26633 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23952-24441 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3952 -2 4441 bp Feature: domain Description: nitrilase Location: 25947-26544 bp Feature: domain Description: nitrilase Location: 2 5947-2 6544 bp Feature: gene Location: 26928-27731 bp Feature: domain Description: AbiEi_3_N Location: 26961-27222 bp Feature: domain Description: AbiEi_3_N Location: 2 6961-2 72 2 2 bp Feature: domain Description: AbiEi_3 Location: 27234-27690 bp Feature: domain Description: AbiEi_3 Location: 2 72 34-2 7690 bp Feature: gene Location: 27718-28638 bp Feature: domain Description: AbiEii Location: 27760-28501 bp Feature: domain Description: AbiEii Location: 2 7760-2 8501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)