myRT

myRT report for GCA_009791125.1_ASM979112v1

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Seq: WSXI01000178.1 Escherichia coli strain IH28c NODE_178_length_3095_cov_29.201819, whole genome shotgun sequence (3095 bp)
Overview 1 RT 1: 107-1506 bp Neighborhood of RT #1 [107, 1506] RVT-GII Feature: gene Location: 107-928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-91 1 bp Feature: gene Location: 1050-1268 bp Feature: gene Location: 1375-1506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WSXI01000194.1 Escherichia coli strain IH28c NODE_194_length_2314_cov_18.268861, whole genome shotgun sequence (2314 bp)
Overview 1 RT 1: 2-2311 bp Neighborhood of RT #1 [2, 2311] RVT-GII GIIM Feature: gene Location: 2-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-2 30 bp Feature: domain Description: GIIM Note: maturase Location: 278-482 bp Feature: domain Description: GIIM Note: maturase Location: 2 78-482 bp Feature: gene Location: 653-2311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WSXI01000079.1 Escherichia coli strain IH28c NODE_79_length_20070_cov_23.090157, whole genome shotgun sequence (20070 bp)
Overview 1 RT 1: 193-5851 bp Neighborhood of RT #1 [193, 5880] PinE COG3680 RVT-Retrons PRK09692 Feature: gene Location: 193-747 bp Feature: domain Description: PinE Location: 196-733 bp Feature: domain Description: PinE Location: 196-73 3 bp Feature: gene Location: 805-1578 bp Feature: domain Description: COG3680 Location: 808-1576 bp Feature: domain Description: COG3 680 Location: 808-1576 bp Feature: gene Location: 2290-4125 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2425-3121 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2425-3 121 bp Feature: gene Location: 4237-4365 bp Feature: gene Location: 4666-5880 bp Feature: domain Description: PRK09692 Location: 4675-5851 bp Feature: domain Description: PRK09692 Location: 4675-5851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), COG3680 (Uncharacterized protein ), RVT-Retrons, PRK09692 (Integrase; provisional)