myRT

myRT report for GCA_009791265.1_ASM979126v1

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Seq: WSXQ01000159.1 Escherichia coli strain IH3c NODE_159_length_2751_cov_21.682165, whole genome shotgun sequence (2751 bp)
Overview 1 RT 1: 1-2627 bp Neighborhood of RT #1 [1, 2644] InsA RVT-GII PRK10276 Feature: gene Location: 1-264 bp Feature: domain Description: InsA Location: 4-265 bp Feature: domain Description: InsA Location: 4-265 bp Feature: gene Location: 415-1902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 820-1510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 820-1 51 0 bp Feature: gene Location: 1908-2075 bp Feature: gene Location: 2303-2644 bp Feature: domain Description: PRK10276 Location: 2306-2627 bp Feature: domain Description: PRK1 0276 Location: 2306-2627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: WSXQ01000187.1 Escherichia coli strain IH3c NODE_187_length_1871_cov_108.460436, whole genome shotgun sequence (1871 bp)
Overview 1 RT 1: 256-1534 bp Neighborhood of RT #1 [256, 1779] RVT-GII GIIM Feature: gene Location: 256-1779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529-1261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 9-12 61 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1534 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WSXQ01000008.1 Escherichia coli strain IH3c NODE_8_length_103877_cov_20.766352, whole genome shotgun sequence (103877 bp)
Overview 1 RT 1: 22390-26348 bp Neighborhood of RT #1 [22390, 26348] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 22390-22605 bp Feature: gene Location: 22696-22977 bp Feature: domain Description: HTH_XRE Location: 22711-22876 bp Feature: domain Description: HTH_XRE Location: 22711-22876 bp Feature: gene Location: 22970-24070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23111-23663 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 111-23 663 bp Feature: gene Location: 24147-25649 bp Feature: domain Description: PRK13889 Location: 24150-24732 bp Feature: domain Description: PRK13 889 Location: 24150-2473 2 bp Feature: gene Location: 26154-26348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)