myRT

myRT report for GCA_009795715.1_ASM979571v1

Download annotations/find similar RTs

Seq: WTCR01000025.1 Labilibaculum sp. A4 NODE_25_length_18108_cov_54.7765, whole genome shotgun sequence (18108 bp)
Overview 1 RT 1: 167-4208 bp Neighborhood of RT #1 [167, 4228] WG_beta_rep WG_beta_rep GIIM RVT-GII LUD_dom Feature: gene Location: 167-1090 bp Feature: domain Description: WG_beta_rep Location: 272-389 bp Feature: domain Description: WG_beta_rep Location: 272-389 bp Feature: domain Description: WG_beta_rep Location: 425-488 bp Feature: domain Description: WG_beta_rep Location: 425-488 bp Feature: gene Location: 1579-1785 bp Feature: domain Description: GIIM Note: maturase Location: 1585-1777 bp Feature: domain Description: GIIM Note: maturase Location: 1 585-1 777 bp Feature: gene Location: 1806-2717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001-2616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001 -261 6 bp Feature: gene Location: 2992-3360 bp Feature: gene Location: 3608-4228 bp Feature: domain Description: LUD_dom Location: 3626-4208 bp Feature: domain Description: LUD_dom Location: 3626-4208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WG_beta_rep (pfam14903), GIIM (pfam08388), RVT-GII, LUD_dom (pfam02589)

Seq: WTCR01000002.1 Labilibaculum sp. A4 NODE_2_length_530929_cov_55.5213, whole genome shotgun sequence (530929 bp)
Overview 1 RT 1: 305188-309115 bp Neighborhood of RT #1 [305188, 309115] COG3791 RVT-UG12 Feature: gene Location: 305188-305589 bp Feature: domain Description: COG3791 Location: 305197-305572 bp Feature: domain Description: COG3791 Location: 305197-305572 bp Feature: gene Location: 305955-306137 bp Feature: gene Location: 306208-307830 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 306568-307018 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 306568-307018 bp Feature: gene Location: 308057-308674 bp Feature: gene Location: 308834-309115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3791 (Uncharacterized conserved protein ), RVT-UG12

Seq: WTCR01000003.1 Labilibaculum sp. A4 NODE_3, whole genome shotgun sequence (456311 bp)
Overview 1 RT 1: 202757-208037 bp Neighborhood of RT #1 [202757, 208037] RVT-GII GIIM Beta-lactamase DUF3471 Feature: gene Location: 202757-203023 bp Feature: gene Location: 203234-204472 bp Feature: gene Location: 205144-206460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205339-205954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053 3 9-205954 bp Feature: domain Description: GIIM Note: maturase Location: 206026-206239 bp Feature: domain Description: GIIM Note: maturase Location: 206026-20623 9 bp Feature: gene Location: 206518-207837 bp Feature: domain Description: Beta-lactamase Location: 206650-207505 bp Feature: domain Description: Beta-lactamase Location: 206650-207505 bp Feature: domain Description: DUF3471 Location: 207583-207745 bp Feature: domain Description: DUF3 471 Location: 207583 -207745 bp Feature: gene Location: 207906-208037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Beta-lactamase (pfam00144), DUF3471 (pfam11954)