myRT

myRT report for GCA_009797685.1_ASM979768v1

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Seq: WJTC01000014.1 Klebsiella pneumoniae strain ZRYYKP8A, whole genome shotgun sequence (61012 bp)
Overview 1 RT 1: 47395-52419 bp Neighborhood of RT #1 [47395, 52419] HTH_28 rve RVT-GII Feature: gene Location: 47395-48039 bp Feature: gene Location: 48068-49471 bp Feature: domain Description: HTH_28 Location: 48116-48257 bp Feature: domain Description: HTH_28 Location: 481 1 6-48257 bp Feature: domain Description: rve Location: 48497-48863 bp Feature: domain Description: rve Location: 48497-48863 bp Feature: gene Location: 49664-51151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50069-50759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50069-50759 bp Feature: gene Location: 51281-51901 bp Feature: gene Location: 51910-52419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), rve (pfam00665), RVT-GII

Seq: WJTC01000019.1 Klebsiella pneumoniae strain ZRYYKP8A, whole genome shotgun sequence (38701 bp)
Overview 1 RT 1: 13582-18935 bp Neighborhood of RT #1 [13582, 19072] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13582-14853 bp Feature: domain Description: umuC Location: 13585-14845 bp Feature: domain Description: umuC Location: 13585-14845 bp Feature: gene Location: 14853-15284 bp Feature: domain Description: PRK10276 Location: 14904-15267 bp Feature: domain Description: PRK102 76 Location: 14904-152 67 bp Feature: gene Location: 15691-17178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16096-16786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16096-16786 bp Feature: gene Location: 17427-18398 bp Feature: domain Description: StbA Location: 17430-18375 bp Feature: domain Description: StbA Location: 17430-18375 bp Feature: gene Location: 18401-19072 bp Feature: domain Description: Plasmid_stab_B Location: 18416-18623 bp Feature: domain Description: Plasmid_stab_B Location: 18416-1862 3 bp Feature: domain Description: Plasmid_stab_B Location: 18728-18935 bp Feature: domain Description: Plasmid_stab_B Location: 1872 8-18935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: WJTC01000020.1 Klebsiella pneumoniae strain ZRYYKP8A, whole genome shotgun sequence (25997 bp)
Overview 1 RT 1: 7185-10238 bp Neighborhood of RT #1 [7185, 10238] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7185-7607 bp Feature: domain Description: DUF1380 Location: 7188-7482 bp Feature: domain Description: DUF13 80 Location: 7188-7482 bp Feature: gene Location: 7604-7795 bp Feature: gene Location: 8109-9776 bp Feature: RT Description: RVT_N Location: 8157-8394 bp Feature: RT Description: RVT_N Location: 8157-83 94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8445-9087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8445-9087 bp Feature: domain Description: GIIM Note: maturase Location: 9138-9372 bp Feature: domain Description: GIIM Note: maturase Location: 913 8-93 72 bp Feature: domain Description: HNHc Note: nucleases Location: 9582-9741 bp Feature: domain Description: HNHc Note: nucleases Location: 9582-9741 bp Feature: gene Location: 9813-9959 bp Feature: gene Location: 10056-10238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: WJTC01000004.1 Klebsiella pneumoniae strain ZRYYKP8A, whole genome shotgun sequence (418086 bp)
Overview 1 RT 1: 91472-95733 bp Neighborhood of RT #1 [91472, 95771] PRK10597 RVT-GII PRK05318 Feature: gene Location: 91472-91762 bp Feature: gene Location: 91774-92007 bp Feature: domain Description: PRK10597 Location: 91777-92002 bp Feature: domain Description: PRK10597 Location: 91777-92002 bp Feature: gene Location: 92086-93573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92491-93181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924 91-93181 bp Feature: gene Location: 93727-93945 bp Feature: gene Location: 94410-95771 bp Feature: domain Description: PRK05318 Location: 94434-95733 bp Feature: domain Description: PRK05318 Location: 94 4 34 -95733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional)

Seq: WJTC01000041.1 Klebsiella pneumoniae strain ZRYYKP8A, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-115 4 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJTC01000005.1 Klebsiella pneumoniae strain ZRYYKP8A, whole genome shotgun sequence (409851 bp)
Overview 1 RT 1: 295358-300447 bp Neighborhood of RT #1 [295358, 300455] umuC PRK10276 RVT-GII PinE Feature: gene Location: 295358-296623 bp Feature: domain Description: umuC Location: 295361-296621 bp Feature: domain Description: umuC Location: 29536 1-296 6 21 bp Feature: gene Location: 296625-297044 bp Feature: domain Description: PRK10276 Location: 296628-297039 bp Feature: domain Description: PRK10276 Location: 296 6 28-297039 bp Feature: gene Location: 297124-298611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297529-298219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297529-298219 bp Feature: gene Location: 298617-298784 bp Feature: gene Location: 300006-300455 bp Feature: domain Description: PinE Location: 300015-300447 bp Feature: domain Description: PinE Location: 300015-300447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961)