myRT

myRT report for GCA_009797715.1_ASM979771v1

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Seq: WJTF01000001.1 Klebsiella pneumoniae strain ZRYYKP5B, whole genome shotgun sequence (5428447 bp)
Overview 1 RT 1: 1236932-1242665 bp 2 RT 2: 1401202-1404598 bp 3 RT 3: 1421538-1427492 bp 4 RT 4: 1860273-1866744 bp 5 RT 5: 3114697-3119846 bp 6 RT 6: 3266847-3272610 bp 7 RT 7: 3664940-3667845 bp Neighborhood of RT #1 [1236932, 1242670] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1401202, 1404598] RVT-GII Neighborhood of RT #3 [1421538, 1429792] PHA01972 RVT-GII PHA02515 Neighborhood of RT #4 [1860273, 1866758] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [3114697, 3119854] umuC PRK10276 RVT-GII PinE Neighborhood of RT #6 [3266847, 3272610] umuC PRK10276 RVT-GII RVT-GII Neighborhood of RT #7 [3664940, 3667895] RVT-GII int Feature: gene Location: 1236932-1237783 bp Feature: domain Description: dam Location: 1236935-1237706 bp Feature: domain Description: dam Location: 1 236935-1 237706 bp Feature: gene Location: 1237780-1240164 bp Feature: domain Description: Phage_GPA Location: 1238344-1239310 bp Feature: domain Description: Phage_GPA Location: 1 238344-1 23931 0 bp Feature: gene Location: 1240642-1242129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1241047-1241737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 241 047-1 241 737 bp Feature: gene Location: 1242237-1242425 bp Feature: gene Location: 1242437-1242670 bp Feature: domain Description: DinI Location: 1242482-1242665 bp Feature: domain Description: DinI Location: 1 242482-1 242665 bp Feature: gene Location: 1401202-1401822 bp Feature: gene Location: 1402018-1402356 bp Feature: gene Location: 1402453-1403937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1402855-1403545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 402855-1 403545 bp Feature: gene Location: 1403946-1404113 bp Feature: gene Location: 1404341-1404598 bp Feature: gene Location: 1421538-1424294 bp Feature: domain Description: PHA01972 Location: 1421541-1424283 bp Feature: domain Description: PHA01 972 Location: 1 421 541 -1 424283 bp Feature: gene Location: 1424771-1425193 bp Feature: gene Location: 1425109-1426593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1425511-1426201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42551 1 -1 426201 bp Feature: gene Location: 1426602-1426769 bp Feature: gene Location: 1427135-1429792 bp Feature: domain Description: PHA02515 Location: 1427147-1427492 bp Feature: domain Description: PHA0251 5 Location: 1 4271 47-1 427492 bp Feature: gene Location: 1860273-1861697 bp Feature: domain Description: SbcB Location: 1860279-1861695 bp Feature: domain Description: SbcB Location: 1 860279-1 861 695 bp Feature: gene Location: 1861872-1863041 bp Feature: domain Description: dacD Location: 1861881-1863036 bp Feature: domain Description: dacD Location: 1 861 881 -1 863036 bp Feature: gene Location: 1863559-1865046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1863964-1864654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 863964-1 864654 bp Feature: gene Location: 1865128-1865601 bp Feature: domain Description: PRK10016 Location: 1865131-1865590 bp Feature: domain Description: PRK1 001 6 Location: 1 8651 31 -1 865590 bp Feature: gene Location: 1865685-1866758 bp Feature: domain Description: YccC Location: 1865706-1866744 bp Feature: domain Description: YccC Location: 1 865706-1 866744 bp Feature: gene Location: 3114697-3115962 bp Feature: domain Description: umuC Location: 3114700-3115960 bp Feature: domain Description: umuC Location: 31 1 4700-31 1 5960 bp Feature: gene Location: 3115964-3116383 bp Feature: domain Description: PRK10276 Location: 3115967-3116378 bp Feature: domain Description: PRK1 0276 Location: 31 1 5967-31 1 6378 bp Feature: gene Location: 3116463-3117947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3116865-3117555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 6865-31 1 7555 bp Feature: gene Location: 3117956-3118123 bp Feature: gene Location: 3119345-3119854 bp Feature: domain Description: PinE Location: 3119393-3119846 bp Feature: domain Description: PinE Location: 31 1 9393-31 1 9846 bp Feature: gene Location: 3266847-3268112 bp Feature: domain Description: umuC Location: 3266850-3268110 bp Feature: domain Description: umuC Location: 3266850-32681 1 0 bp Feature: gene Location: 3268115-3268534 bp Feature: domain Description: PRK10276 Location: 3268118-3268529 bp Feature: domain Description: PRK1 0276 Location: 32681 1 8-3268529 bp Feature: gene Location: 3268613-3270097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3269015-3269705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326901 5-3269705 bp Feature: gene Location: 3270106-3270273 bp Feature: gene Location: 3270523-3272007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3270925-3271615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3270925-3271 61 5 bp Feature: gene Location: 3272016-3272183 bp Feature: gene Location: 3272464-3272610 bp Feature: gene Location: 3664940-3666424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665342-3666032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665342-3666032 bp Feature: gene Location: 3666433-3666600 bp Feature: gene Location: 3666843-3667895 bp Feature: domain Description: int Location: 3666846-3667845 bp Feature: domain Description: int Location: 3666846-3667845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), PHA01972 (structural protein), PHA02515 (hypothetical protein; Provisional), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)
umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), int (PHA02601)

Seq: WJTF01000002.1 Klebsiella pneumoniae strain ZRYYKP5B, whole genome shotgun sequence (192339 bp)
Overview 1 RT 1: 5025-8319 bp Neighborhood of RT #1 [5025, 8333] RVT-GII PRK10276 Feature: gene Location: 5025-5240 bp Feature: gene Location: 5507-5737 bp Feature: gene Location: 5971-7506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6376-7114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6376-7114 bp Feature: gene Location: 7557-7790 bp Feature: gene Location: 7908-8333 bp Feature: domain Description: PRK10276 Location: 7911-8319 bp Feature: domain Description: PRK102 76 Location: 7911-8319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: WJTF01000003.1 Klebsiella pneumoniae strain ZRYYKP5B, whole genome shotgun sequence (139027 bp)
Overview 1 RT 1: 21869-25951 bp 2 RT 2: 123488-127091 bp Neighborhood of RT #1 [21869, 26088] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Neighborhood of RT #2 [123488, 127216] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 21869-22300 bp Feature: domain Description: PRK10276 Location: 21920-22283 bp Feature: domain Description: PRK10276 Location: 21920-22283 bp Feature: gene Location: 22498-22710 bp Feature: gene Location: 22785-24194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23112-23802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 112-23 802 bp Feature: gene Location: 24443-25414 bp Feature: domain Description: StbA Location: 24446-25391 bp Feature: domain Description: StbA Location: 24446-253 91 bp Feature: gene Location: 25417-26088 bp Feature: domain Description: Plasmid_stab_B Location: 25432-25639 bp Feature: domain Description: Plasmid_stab_B Location: 2543 2-2563 9 bp Feature: domain Description: Plasmid_stab_B Location: 25744-25951 bp Feature: domain Description: Plasmid_stab_B Location: 25744-25951 bp Feature: gene Location: 123488-123745 bp Feature: gene Location: 123776-124051 bp Feature: gene Location: 124625-126292 bp Feature: RT Description: RVT_N Location: 124673-124910 bp Feature: RT Description: RVT_N Location: 124673 -124910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124961-125603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124961-125603 bp Feature: domain Description: GIIM Note: maturase Location: 125654-125888 bp Feature: domain Description: GIIM Note: maturase Location: 125654-125888 bp Feature: domain Description: HNHc Note: nucleases Location: 126098-126257 bp Feature: domain Description: HNHc Note: nucleases Location: 126098-126257 bp Feature: gene Location: 126606-126797 bp Feature: gene Location: 126794-127216 bp Feature: domain Description: DUF1380 Location: 126797-127091 bp Feature: domain Description: DUF13 80 Location: 126797-127091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: WJTF01000004.1 Klebsiella pneumoniae strain ZRYYKP5B, whole genome shotgun sequence (114259 bp)
Overview 1 RT 1: 18449-22653 bp Neighborhood of RT #1 [18449, 22653] INT_P4_C RVT-GII Feature: gene Location: 18449-18661 bp Feature: gene Location: 19310-20410 bp Feature: domain Description: INT_P4_C Location: 19769-20315 bp Feature: domain Description: INT_P4 _C Location: 19769-20315 bp Feature: gene Location: 20497-21984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20902-21592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20902-21592 bp Feature: gene Location: 21990-22157 bp Feature: gene Location: 22486-22653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII