myRT

myRT report for GCA_009797745.1_ASM979774v1

Download annotations/find similar RTs

Seq: WJTG01000001.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (2249143 bp)
Overview 1 RT 1: 719667-722916 bp 2 RT 2: 1115381-1121399 bp 3 RT 3: 1267672-1273549 bp Neighborhood of RT #1 [719667, 723308] YbjK int RVT-GII Neighborhood of RT #2 [1115381, 1121401] DinI RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #3 [1267672, 1273551] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 719667-720230 bp Feature: domain Description: YbjK Location: 719673-720210 bp Feature: domain Description: YbjK Location: 71 9673-72021 0 bp Feature: gene Location: 720353-721405 bp Feature: domain Description: int Location: 720356-721355 bp Feature: domain Description: int Location: 720356-721 355 bp Feature: gene Location: 721821-723308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722226-722916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722226-72291 6 bp Feature: gene Location: 1115381-1115623 bp Feature: domain Description: DinI Location: 1115432-1115612 bp Feature: domain Description: DinI Location: 1 1 1 5432-1 1 1 561 2 bp Feature: gene Location: 1115638-1115784 bp Feature: gene Location: 1116238-1117725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1116643-1117333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 6643-1 1 1 7333 bp Feature: gene Location: 1118148-1119635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118553-1119243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 8553-1 1 1 9243 bp Feature: gene Location: 1119714-1120133 bp Feature: domain Description: PRK10276 Location: 1119717-1120128 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 971 7-1 1 201 28 bp Feature: gene Location: 1120136-1121401 bp Feature: domain Description: umuC Location: 1120139-1121399 bp Feature: domain Description: umuC Location: 1 1 201 39-1 1 21 399 bp Feature: gene Location: 1267672-1268388 bp Feature: domain Description: Rve Location: 1267687-1268332 bp Feature: domain Description: Rve Location: 1 267687-1 268332 bp Feature: gene Location: 1268394-1268903 bp Feature: domain Description: PinE Location: 1268442-1268895 bp Feature: domain Description: PinE Location: 1 268442-1 268895 bp Feature: gene Location: 1270298-1271785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1270703-1271393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 270703-1 271 393 bp Feature: gene Location: 1271865-1272284 bp Feature: domain Description: PRK10276 Location: 1271868-1272279 bp Feature: domain Description: PRK1 0276 Location: 1 271 868-1 272279 bp Feature: gene Location: 1272286-1273551 bp Feature: domain Description: umuC Location: 1272289-1273549 bp Feature: domain Description: umuC Location: 1 272289-1 273549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: WJTG01000010.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (52362 bp)
Overview 1 RT 1: 27856-31938 bp Neighborhood of RT #1 [27856, 32075] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 27856-28287 bp Feature: domain Description: PRK10276 Location: 27907-28270 bp Feature: domain Description: PRK102 76 Location: 2 7907-2 82 70 bp Feature: gene Location: 28521-28688 bp Feature: gene Location: 28694-30181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29099-29789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9099-2 9789 bp Feature: gene Location: 30430-31401 bp Feature: domain Description: StbA Location: 30433-31378 bp Feature: domain Description: StbA Location: 30433-31378 bp Feature: gene Location: 31404-32075 bp Feature: domain Description: Plasmid_stab_B Location: 31419-31626 bp Feature: domain Description: Plasmid_stab_B Location: 31419-3162 6 bp Feature: domain Description: Plasmid_stab_B Location: 31731-31938 bp Feature: domain Description: Plasmid_stab_B Location: 31731-31938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: WJTG01000017.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJTG01000002.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (1477690 bp)
Overview 1 RT 1: 19791-23849 bp 2 RT 2: 182381-186417 bp Neighborhood of RT #1 [19791, 23849] Terminase_2 RVT-GII Neighborhood of RT #2 [182381, 187271] DinI RVT-GII Phage_GPA Feature: gene Location: 19791-20375 bp Feature: domain Description: Terminase_2 Location: 19836-20301 bp Feature: domain Description: Terminase_2 Location: 19836-20301 bp Feature: gene Location: 20453-20710 bp Feature: gene Location: 21111-22598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21516-22206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21516-22206 bp Feature: gene Location: 22695-23033 bp Feature: gene Location: 23229-23849 bp Feature: gene Location: 182381-182614 bp Feature: domain Description: DinI Location: 182426-182609 bp Feature: domain Description: DinI Location: 1824 26-182609 bp Feature: gene Location: 182626-182814 bp Feature: gene Location: 182922-184406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183324-184014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183324 -184 014 bp Feature: gene Location: 184415-184582 bp Feature: gene Location: 184887-187271 bp Feature: domain Description: Phage_GPA Location: 185451-186417 bp Feature: domain Description: Phage_GPA Location: 1854 51-1864 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Terminase_2 (pfam03592), RVT-GII, DinI (pfam06183), Phage_GPA (pfam05840)

Seq: WJTG01000003.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (702454 bp)
Overview 1 RT 1: 262662-267543 bp Neighborhood of RT #1 [262662, 267548] YccC PRK10016 RVT-GII dacD Feature: gene Location: 262662-263720 bp Feature: domain Description: YccC Location: 262668-263706 bp Feature: domain Description: YccC Location: 262668-263706 bp Feature: gene Location: 263819-264292 bp Feature: domain Description: PRK10016 Location: 263822-264281 bp Feature: domain Description: PRK10016 Location: 263822-264281 bp Feature: gene Location: 264374-265861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264779-265469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264779-265 469 bp Feature: gene Location: 265867-266034 bp Feature: gene Location: 266379-267548 bp Feature: domain Description: dacD Location: 266388-267543 bp Feature: domain Description: dacD Location: 266388-2675 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397)

Seq: WJTG01000007.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (186906 bp)
Overview 1 RT 1: 178920-182128 bp Neighborhood of RT #1 [178920, 182128] PRK10276 RVT-GII Feature: gene Location: 178920-179345 bp Feature: domain Description: PRK10276 Location: 178923-179331 bp Feature: domain Description: PRK10276 Location: 178923-179331 bp Feature: gene Location: 179463-179696 bp Feature: gene Location: 179747-181282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180152-180890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180152-180890 bp Feature: gene Location: 181168-181746 bp Feature: gene Location: 181805-182128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: WJTG01000008.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (114259 bp)
Overview 1 RT 1: 18449-22653 bp Neighborhood of RT #1 [18449, 22653] INT_P4_C RVT-GII Feature: gene Location: 18449-18661 bp Feature: gene Location: 19310-20410 bp Feature: domain Description: INT_P4_C Location: 19769-20315 bp Feature: domain Description: INT_P4_C Location: 197 69-20315 bp Feature: gene Location: 20497-21984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20902-21592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20902-21592 bp Feature: gene Location: 21990-22157 bp Feature: gene Location: 22486-22653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII

Seq: WJTG01000009.1 Klebsiella pneumoniae strain ZRYYKP5A, whole genome shotgun sequence (75059 bp)
Overview 1 RT 1: 59520-63123 bp Neighborhood of RT #1 [59520, 63248] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 59520-59777 bp Feature: gene Location: 59808-60083 bp Feature: gene Location: 60657-62324 bp Feature: RT Description: RVT_N Location: 60705-60942 bp Feature: RT Description: RVT_N Location: 60705-60942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60993-61635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60993-61635 bp Feature: domain Description: GIIM Note: maturase Location: 61686-61920 bp Feature: domain Description: GIIM Note: maturase Location: 6168 6-61920 bp Feature: domain Description: HNHc Note: nucleases Location: 62130-62289 bp Feature: domain Description: HNHc Note: nucleases Location: 62130-6228 9 bp Feature: gene Location: 62638-62829 bp Feature: gene Location: 62826-63248 bp Feature: domain Description: DUF1380 Location: 62829-63123 bp Feature: domain Description: DUF138 0 Location: 628 29-63123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)