myRT

myRT report for GCA_009797775.1_ASM979777v1

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Seq: WJTH01000001.1 Klebsiella pneumoniae strain ZRYYKP3B, whole genome shotgun sequence (1148393 bp)
Overview 1 RT 1: 994536-999685 bp Neighborhood of RT #1 [994536, 999693] umuC PRK10276 RVT-GII PinE Feature: gene Location: 994536-995801 bp Feature: domain Description: umuC Location: 994539-995799 bp Feature: domain Description: umuC Location: 994539-995799 bp Feature: gene Location: 995803-996222 bp Feature: domain Description: PRK10276 Location: 995806-996217 bp Feature: domain Description: PRK1 0276 Location: 995806-99621 7 bp Feature: gene Location: 996302-997786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996704-997394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996704-997394 bp Feature: gene Location: 997795-997962 bp Feature: gene Location: 999184-999693 bp Feature: domain Description: PinE Location: 999232-999685 bp Feature: domain Description: PinE Location: 999232-999685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961)

Seq: WJTH01000012.1 Klebsiella pneumoniae strain ZRYYKP3B, whole genome shotgun sequence (60482 bp)
Overview 1 RT 1: 21869-25951 bp Neighborhood of RT #1 [21869, 26088] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 21869-22300 bp Feature: domain Description: PRK10276 Location: 21920-22283 bp Feature: domain Description: PRK102 76 Location: 2 192 0-2 2 2 83 bp Feature: gene Location: 22498-22710 bp Feature: gene Location: 22785-24194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23112-23802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3112 -2 3802 bp Feature: gene Location: 24443-25414 bp Feature: domain Description: StbA Location: 24446-25391 bp Feature: domain Description: StbA Location: 2 4446-2 5391 bp Feature: gene Location: 25417-26088 bp Feature: domain Description: Plasmid_stab_B Location: 25432-25639 bp Feature: domain Description: Plasmid_stab_B Location: 2 5432 -2 5639 bp Feature: domain Description: Plasmid_stab_B Location: 25744-25951 bp Feature: domain Description: Plasmid_stab_B Location: 2 5744-2 5951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: WJTH01000013.1 Klebsiella pneumoniae strain ZRYYKP3B, whole genome shotgun sequence (59205 bp)
Overview 1 RT 1: 11812-15252 bp Neighborhood of RT #1 [11812, 15252] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 11812-12234 bp Feature: domain Description: DUF1380 Location: 11815-12109 bp Feature: domain Description: DUF13 80 Location: 11815-12109 bp Feature: gene Location: 12231-12422 bp Feature: gene Location: 12736-14403 bp Feature: RT Description: RVT_N Location: 12784-13021 bp Feature: RT Description: RVT_N Location: 12784-13 021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13072-13714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 072-13 714 bp Feature: domain Description: GIIM Note: maturase Location: 13765-13999 bp Feature: domain Description: GIIM Note: maturase Location: 13 765-13 999 bp Feature: domain Description: HNHc Note: nucleases Location: 14209-14368 bp Feature: domain Description: HNHc Note: nucleases Location: 14209-143 68 bp Feature: gene Location: 14683-14865 bp Feature: gene Location: 14977-15252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: WJTH01000002.1 Klebsiella pneumoniae strain ZRYYKP3B, whole genome shotgun sequence (1091223 bp)
Overview 1 RT 1: 198847-204580 bp 2 RT 2: 363117-366513 bp 3 RT 3: 386686-388611 bp 4 RT 4: 822079-828550 bp Neighborhood of RT #1 [198847, 204585] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [363117, 366513] RVT-GII Neighborhood of RT #3 [386686, 388611] group_II_RT_mat RVT-GII group_II_RT_mat Neighborhood of RT #4 [822079, 828564] SbcB dacD RVT-GII PRK10016 YccC Feature: gene Location: 198847-199698 bp Feature: domain Description: dam Location: 198850-199621 bp Feature: domain Description: dam Location: 198850-199621 bp Feature: gene Location: 199695-202079 bp Feature: domain Description: Phage_GPA Location: 200259-201225 bp Feature: domain Description: Phage_GPA Location: 200259-201225 bp Feature: gene Location: 202557-204044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202962-203652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202962-203652 bp Feature: gene Location: 204152-204340 bp Feature: gene Location: 204352-204585 bp Feature: domain Description: DinI Location: 204397-204580 bp Feature: domain Description: DinI Location: 204 397-204 580 bp Feature: gene Location: 363117-363737 bp Feature: gene Location: 363933-364271 bp Feature: gene Location: 364368-365852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364770-365460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364 770-3654 60 bp Feature: gene Location: 365861-366028 bp Feature: gene Location: 366256-366513 bp Feature: gene Location: 386686-387108 bp Feature: gene Location: 387024-387488 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 387108-387354 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 387108-387354 bp Feature: gene Location: 387610-387828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387634-387784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387634 -387784 bp Feature: gene Location: 387861-388331 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 387999-388239 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 387999-388239 bp Feature: gene Location: 388399-388611 bp Feature: gene Location: 822079-823503 bp Feature: domain Description: SbcB Location: 822085-823501 bp Feature: domain Description: SbcB Location: 822085-823501 bp Feature: gene Location: 823678-824847 bp Feature: domain Description: dacD Location: 823687-824842 bp Feature: domain Description: dacD Location: 823687-824 84 2 bp Feature: gene Location: 825365-826852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825770-826460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825770-8264 60 bp Feature: gene Location: 826934-827407 bp Feature: domain Description: PRK10016 Location: 826937-827396 bp Feature: domain Description: PRK10016 Location: 826937-827396 bp Feature: gene Location: 827491-828564 bp Feature: domain Description: YccC Location: 827512-828550 bp Feature: domain Description: YccC Location: 827512-828550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), group_II_RT_mat (TIGR04416), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: WJTH01000022.1 Klebsiella pneumoniae strain ZRYYKP3B, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-115 4 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJTH01000008.1 Klebsiella pneumoniae strain ZRYYKP3B, whole genome shotgun sequence (211510 bp)
Overview 1 RT 1: 118940-122148 bp Neighborhood of RT #1 [118940, 122148] PRK10276 RVT-GII Feature: gene Location: 118940-119365 bp Feature: domain Description: PRK10276 Location: 118943-119351 bp Feature: domain Description: PRK10276 Location: 118943-119351 bp Feature: gene Location: 119483-119716 bp Feature: gene Location: 119767-121302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120172-120910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120172-120910 bp Feature: gene Location: 121188-121766 bp Feature: gene Location: 121825-122148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII