myRT

myRT report for GCA_009797785.1_ASM979778v1

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Seq: WJTI01000001.1 Klebsiella pneumoniae strain ZRYYKP3A, whole genome shotgun sequence (5444316 bp)
Overview 1 RT 1: 1239086-1244819 bp 2 RT 2: 1403356-1406752 bp 3 RT 3: 1423692-1429646 bp 4 RT 4: 1862427-1868898 bp 5 RT 5: 3130387-3135536 bp 6 RT 6: 3282537-3288300 bp 7 RT 7: 3680630-3683535 bp Neighborhood of RT #1 [1239086, 1244824] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1403356, 1406752] RVT-GII Neighborhood of RT #3 [1423692, 1431946] PHA01972 RVT-GII PHA02515 Neighborhood of RT #4 [1862427, 1868912] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [3130387, 3135544] umuC PRK10276 RVT-GII PinE Neighborhood of RT #6 [3282537, 3288300] umuC PRK10276 RVT-GII RVT-GII Neighborhood of RT #7 [3680630, 3683585] RVT-GII int Feature: gene Location: 1239086-1239937 bp Feature: domain Description: dam Location: 1239089-1239860 bp Feature: domain Description: dam Location: 1 239089-1 239860 bp Feature: gene Location: 1239934-1242318 bp Feature: domain Description: Phage_GPA Location: 1240498-1241464 bp Feature: domain Description: Phage_GPA Location: 1 240498-1 241 464 bp Feature: gene Location: 1242796-1244283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243201-1243891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 243201 -1 243891 bp Feature: gene Location: 1244391-1244579 bp Feature: gene Location: 1244591-1244824 bp Feature: domain Description: DinI Location: 1244636-1244819 bp Feature: domain Description: DinI Location: 1 244636-1 24481 9 bp Feature: gene Location: 1403356-1403976 bp Feature: gene Location: 1404172-1404510 bp Feature: gene Location: 1404607-1406091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1405009-1405699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 405009-1 405699 bp Feature: gene Location: 1406100-1406267 bp Feature: gene Location: 1406495-1406752 bp Feature: gene Location: 1423692-1426448 bp Feature: domain Description: PHA01972 Location: 1423695-1426437 bp Feature: domain Description: PHA01 972 Location: 1 423695-1 426437 bp Feature: gene Location: 1426925-1427347 bp Feature: gene Location: 1427263-1428747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1427665-1428355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 427665-1 428355 bp Feature: gene Location: 1428756-1428923 bp Feature: gene Location: 1429289-1431946 bp Feature: domain Description: PHA02515 Location: 1429301-1429646 bp Feature: domain Description: PHA0251 5 Location: 1 429301 -1 429646 bp Feature: gene Location: 1862427-1863851 bp Feature: domain Description: SbcB Location: 1862433-1863849 bp Feature: domain Description: SbcB Location: 1 862433-1 863849 bp Feature: gene Location: 1864026-1865195 bp Feature: domain Description: dacD Location: 1864035-1865190 bp Feature: domain Description: dacD Location: 1 864035-1 8651 90 bp Feature: gene Location: 1865713-1867200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1866118-1866808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8661 1 8-1 866808 bp Feature: gene Location: 1867282-1867755 bp Feature: domain Description: PRK10016 Location: 1867285-1867744 bp Feature: domain Description: PRK1 001 6 Location: 1 867285-1 867744 bp Feature: gene Location: 1867839-1868912 bp Feature: domain Description: YccC Location: 1867860-1868898 bp Feature: domain Description: YccC Location: 1 867860-1 868898 bp Feature: gene Location: 3130387-3131652 bp Feature: domain Description: umuC Location: 3130390-3131650 bp Feature: domain Description: umuC Location: 31 30390-31 31 650 bp Feature: gene Location: 3131654-3132073 bp Feature: domain Description: PRK10276 Location: 3131657-3132068 bp Feature: domain Description: PRK1 0276 Location: 31 31 657-31 32068 bp Feature: gene Location: 3132153-3133637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3132555-3133245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 32555-31 33245 bp Feature: gene Location: 3133646-3133813 bp Feature: gene Location: 3135035-3135544 bp Feature: domain Description: PinE Location: 3135083-3135536 bp Feature: domain Description: PinE Location: 31 35083-31 35536 bp Feature: gene Location: 3282537-3283802 bp Feature: domain Description: umuC Location: 3282540-3283800 bp Feature: domain Description: umuC Location: 3282540-3283800 bp Feature: gene Location: 3283805-3284224 bp Feature: domain Description: PRK10276 Location: 3283808-3284219 bp Feature: domain Description: PRK1 0276 Location: 3283808-328421 9 bp Feature: gene Location: 3284303-3285787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3284705-3285395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3284705-3285395 bp Feature: gene Location: 3285796-3285963 bp Feature: gene Location: 3286213-3287697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3286615-3287305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328661 5-3287305 bp Feature: gene Location: 3287706-3287873 bp Feature: gene Location: 3288154-3288300 bp Feature: gene Location: 3680630-3682114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3681032-3681722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3681 032-3681 722 bp Feature: gene Location: 3682123-3682290 bp Feature: gene Location: 3682533-3683585 bp Feature: domain Description: int Location: 3682536-3683535 bp Feature: domain Description: int Location: 3682536-3683535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), PHA01972 (structural protein), PHA02515 (hypothetical protein; Provisional), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)
umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), int (PHA02601)

Seq: WJTI01000002.1 Klebsiella pneumoniae strain ZRYYKP3A, whole genome shotgun sequence (256171 bp)
Overview 1 RT 1: 240300-243594 bp Neighborhood of RT #1 [240300, 243608] RVT-GII PRK10276 Feature: gene Location: 240300-240515 bp Feature: gene Location: 240782-241012 bp Feature: gene Location: 241246-242781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241651-242389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 41651-2 42 389 bp Feature: gene Location: 242832-243065 bp Feature: gene Location: 243183-243608 bp Feature: domain Description: PRK10276 Location: 243186-243594 bp Feature: domain Description: PRK102 76 Location: 2 43186-2 43594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: WJTI01000003.1 Klebsiella pneumoniae strain ZRYYKP3A, whole genome shotgun sequence (160406 bp)
Overview 1 RT 1: 28516-31956 bp 2 RT 2: 104585-108667 bp Neighborhood of RT #1 [28516, 31956] DUF1380 RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [104585, 108804] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 28516-28938 bp Feature: domain Description: DUF1380 Location: 28519-28813 bp Feature: domain Description: DUF13 80 Location: 28519-28813 bp Feature: gene Location: 28935-29126 bp Feature: gene Location: 29440-31107 bp Feature: RT Description: RVT_N Location: 29488-29725 bp Feature: RT Description: RVT_N Location: 29488-29725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29776-30418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29776-3 0418 bp Feature: domain Description: GIIM Note: maturase Location: 30469-30703 bp Feature: domain Description: GIIM Note: maturase Location: 3 0469-3 0703 bp Feature: domain Description: HNHc Note: nucleases Location: 30913-31072 bp Feature: domain Description: HNHc Note: nucleases Location: 3 0913 -3 1072 bp Feature: gene Location: 31387-31569 bp Feature: gene Location: 31681-31956 bp Feature: gene Location: 104585-105016 bp Feature: domain Description: PRK10276 Location: 104636-104999 bp Feature: domain Description: PRK10276 Location: 10463 6-104999 bp Feature: gene Location: 105214-105426 bp Feature: gene Location: 105501-106910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105828-106518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105828-106518 bp Feature: gene Location: 107159-108130 bp Feature: domain Description: StbA Location: 107162-108107 bp Feature: domain Description: StbA Location: 107162-108107 bp Feature: gene Location: 108133-108804 bp Feature: domain Description: Plasmid_stab_B Location: 108148-108355 bp Feature: domain Description: Plasmid_stab_B Location: 108148-1083 55 bp Feature: domain Description: Plasmid_stab_B Location: 108460-108667 bp Feature: domain Description: Plasmid_stab_B Location: 108460-108667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), StbA (pfam06406), Plasmid_stab_B (pfam10784)