myRT

myRT report for GCA_009798105.1_ASM979810v1

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Seq: WTQT01000177.1 Escherichia coli strain 8379wE2 NODE_267_length_5759_cov_6.34517, whole genome shotgun sequence (5759 bp)
Overview 1 RT 1: 2-5638 bp Neighborhood of RT #1 [2, 5757] prfC PRK10597 RVT-Retrons TIR_2 Caudo_TAP Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 2-193 bp Feature: domain Description: prfC Location: 20-194 bp Feature: domain Description: prfC Location: 20-1 94 bp Feature: gene Location: 386-673 bp Feature: domain Description: PRK10597 Location: 416-656 bp Feature: domain Description: PRK1 0597 Location: 41 6-656 bp Feature: gene Location: 1033-2637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1324-1915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 324-1 91 5 bp Feature: domain Description: TIR_2 Location: 2242-2530 bp Feature: domain Description: TIR_2 Location: 2242-2530 bp Feature: gene Location: 3083-3667 bp Feature: domain Description: Caudo_TAP Location: 3299-3656 bp Feature: domain Description: Caudo_TAP Location: 3299-3656 bp Feature: gene Location: 3667-5757 bp Feature: domain Description: Phage_fiber_2 Location: 3796-3916 bp Feature: domain Description: Phage_fiber_2 Location: 3796-391 6 bp Feature: domain Description: Collar Location: 5128-5266 bp Feature: domain Description: Collar Location: 51 28-5266 bp Feature: domain Description: Phage_fiber Location: 5317-5356 bp Feature: domain Description: Phage_fiber Location: 531 7-5356 bp Feature: domain Description: Phage_fiber Location: 5413-5452 bp Feature: domain Description: Phage_fiber Location: 541 3-5452 bp Feature: domain Description: Phage_fiber Location: 5458-5485 bp Feature: domain Description: Phage_fiber Location: 5458-5485 bp Feature: domain Description: Phage_fiber Location: 5560-5599 bp Feature: domain Description: Phage_fiber Location: 5560-5599 bp Feature: domain Description: Phage_fiber Location: 5605-5638 bp Feature: domain Description: Phage_fiber Location: 5605-5638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), prfC (TIGR00503), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), PRK10597 (DNA damage-inducible protein I; Provisional)