myRT

myRT report for GCA_009807005.1_ASM980700v1

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Seq: WUBR01000001.1 Erythrobacter sp. GH3-10 contig1, whole genome shotgun sequence (1598141 bp)
Overview 1 RT 1: 1303789-1310204 bp Neighborhood of RT #1 [1303789, 1310233] PinE RVT-CRISPR-like ALDH_SSADH1_GabD1 SRAP Feature: gene Location: 1303789-1304772 bp Feature: gene Location: 1304918-1305475 bp Feature: domain Description: PinE Location: 1304921-1305467 bp Feature: domain Description: PinE Location: 1 304921 -1 305467 bp Feature: gene Location: 1306099-1307487 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1306399-1306939 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 306399-1 306939 bp Feature: gene Location: 1307884-1309263 bp Feature: domain Description: ALDH_SSADH1_GabD1 Location: 1307968-1309249 bp Feature: domain Description: ALDH_SSADH1 _GabD1 Location: 1 307968-1 309249 bp Feature: gene Location: 1309616-1310233 bp Feature: domain Description: SRAP Location: 1309619-1310204 bp Feature: domain Description: SRAP Location: 1 30961 9-1 31 0204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-CRISPR, ALDH_SSADH1_GabD1 (cd07100), SRAP (pfam02586)

Seq: WUBR01000002.1 Erythrobacter sp. GH3-10 contig2, whole genome shotgun sequence (997227 bp)
Overview 1 RT 1: 350081-361202 bp Neighborhood of RT #1 [350081, 361210] POLBc POLBc POLBc RVT-UG8 greA carB Feature: gene Location: 350081-350443 bp Feature: gene Location: 350440-353532 bp Feature: domain Description: POLBc Location: 351412-351490 bp Feature: domain Description: POLBc Location: 351412 -351490 bp Feature: domain Description: POLBc Location: 351913-352042 bp Feature: domain Description: POLBc Location: 351913-352 042 bp Feature: domain Description: POLBc Location: 352150-352483 bp Feature: domain Description: POLBc Location: 352 150-352 483 bp Feature: gene Location: 355034-357010 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 355556-356000 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 355556-356000 bp Feature: gene Location: 357320-357787 bp Feature: domain Description: greA Location: 357323-357779 bp Feature: domain Description: greA Location: 35732 3-357779 bp Feature: gene Location: 357887-361210 bp Feature: domain Description: carB Location: 357890-361202 bp Feature: domain Description: carB Location: 357890-3612 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT POLBc (smart00486), RVT-UG8, greA (TIGR01462), carB (PRK12815)