myRT

myRT report for GCA_009807485.1_ASM980748v1

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Seq: WUDS01000011.1 Algibacter wandonensis strain KCTC 32381 Scaffold10_1, whole genome shotgun sequence (135776 bp)
Overview 1 RT 1: 90826-96651 bp Neighborhood of RT #1 [90826, 96716] RVT-UG7 LRR_3 LRR_5 Por_Secre_tail GH43_62_32_68_117_130-like Feature: gene Location: 90826-91383 bp Feature: gene Location: 91358-91921 bp Feature: gene Location: 92074-93672 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 92533-92923 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 92533-92923 bp Feature: gene Location: 94220-95458 bp Feature: domain Description: LRR_3 Location: 94406-94679 bp Feature: domain Description: LRR_3 Location: 94406-94679 bp Feature: domain Description: LRR_5 Location: 94862-95042 bp Feature: domain Description: LRR_5 Location: 94862-95042 bp Feature: domain Description: Por_Secre_tail Location: 95243-95456 bp Feature: domain Description: Por_Secre_tail Location: 95243-95456 bp Feature: gene Location: 95553-96716 bp Feature: domain Description: GH43_62_32_68_117_130-like Location: 95760-96651 bp Feature: domain Description: GH43_62_32_68_1 1 7_1 30-like Location: 95760-96651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, LRR_3 (sd00036), LRR_5 (pfam13306), Por_Secre_tail (TIGR04183), GH43_62_32_68_117_130-like (cd08994)

Seq: WUDS01000013.1 Algibacter wandonensis strain KCTC 32381 Scaffold12_1, whole genome shotgun sequence (55559 bp)
Overview 1 RT 1: 22566-26898 bp Neighborhood of RT #1 [22566, 26912] RVT-UG14 T2SSG Feature: gene Location: 22566-22850 bp Feature: gene Location: 23063-23758 bp Feature: gene Location: 23914-25452 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 24340-24829 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2 4340-2 482 9 bp Feature: gene Location: 25678-26280 bp Feature: gene Location: 26445-26912 bp Feature: domain Description: T2SSG Location: 26670-26898 bp Feature: domain Description: T2 SSG Location: 2 6670-2 6898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, T2SSG (pfam08334)

Seq: WUDS01000010.1 Algibacter wandonensis strain KCTC 32381 Scaffold9_1, whole genome shotgun sequence (143983 bp)
Overview 1 RT 1: 194-9603 bp Neighborhood of RT #1 [194, 9608] WGR_DNA_ligase RVT-Retrons TPR_12 TPR_12 TPR_12 COG4585 NrdG Feature: gene Location: 194-3244 bp Feature: domain Description: WGR_DNA_ligase Location: 218-437 bp Feature: domain Description: WGR_DNA_ligase Location: 218-43 7 bp Feature: gene Location: 3249-4877 bp Feature: gene Location: 5139-6659 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5691-6306 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5691-63 06 bp Feature: gene Location: 6878-8893 bp Feature: domain Description: TPR_12 Location: 7178-7325 bp Feature: domain Description: TPR_12 Location: 7178-73 25 bp Feature: domain Description: TPR_12 Location: 7382-7583 bp Feature: domain Description: TPR_12 Location: 73 82-7583 bp Feature: domain Description: TPR_12 Location: 7733-7946 bp Feature: domain Description: TPR_12 Location: 773 3 -7946 bp Feature: domain Description: COG4585 Location: 8207-8888 bp Feature: domain Description: COG4585 Location: 8207-8888 bp Feature: gene Location: 8979-9608 bp Feature: domain Description: NrdG Location: 9024-9603 bp Feature: domain Description: NrdG Location: 9024-9603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, TPR_12 (pfam13424), COG4585 (Signal transduction histidine kinase ), NrdG (TIGR02491)