myRT

myRT report for GCA_009811455.1_ASM981145v1

Download annotations/find similar RTs

Seq: BLII01000143.1 Tenacibaculum sp. KUL118 DNA, sequence143, whole genome shotgun sequence (6319 bp)
Overview 1 RT 1: 4220-6308 bp Neighborhood of RT #1 [4220, 6316] RVT-UG2 Feature: gene Location: 4220-4945 bp Feature: gene Location: 5083-5256 bp Feature: gene Location: 5423-6316 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5669-6308 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5669-6308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: BLII01000144.1 Tenacibaculum sp. KUL118 DNA, sequence144, whole genome shotgun sequence (18539 bp)
Overview 1 RT 1: 3-2869 bp Neighborhood of RT #1 [3, 2886] RVT-UG2 RmuC Laminin_G_3 Feature: gene Location: 3-590 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6-228 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6-2 2 8 bp Feature: gene Location: 677-2056 bp Feature: domain Description: RmuC Location: 818-2048 bp Feature: domain Description: RmuC Location: 818-2 048 bp Feature: gene Location: 2113-2886 bp Feature: domain Description: Laminin_G_3 Location: 2368-2869 bp Feature: domain Description: Laminin_G_3 Location: 2 368-2 869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, RmuC (pfam02646), Laminin_G_3 (pfam13385)

Seq: BLII01000162.1 Tenacibaculum sp. KUL118 DNA, sequence162, whole genome shotgun sequence (49829 bp)
Overview 1 RT 1: 1422-3854 bp Neighborhood of RT #1 [1422, 3854] Rhs_assc_core HNHc RVT-Retrons HTH_XRE Feature: gene Location: 1422-1703 bp Feature: gene Location: 1707-2327 bp Feature: domain Description: Rhs_assc_core Location: 1710-1845 bp Feature: domain Description: Rhs_assc_core Location: 1710-1845 bp Feature: domain Description: HNHc Note: nucleases Location: 2079-2244 bp Feature: domain Description: HNHc Note: nucleases Location: 2079-2244 bp Feature: gene Location: 2408-3382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2591-3125 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2591-3 125 bp Feature: gene Location: 3360-3668 bp Feature: domain Description: HTH_XRE Location: 3375-3537 bp Feature: domain Description: HTH_XRE Location: 3 3 75-3 53 7 bp Feature: gene Location: 3696-3854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rhs_assc_core (TIGR03696), HNHc (smart00507), RVT-Retrons, HTH_XRE (smart00530)