myRT

myRT report for GCA_009811815.1_ASM981181v1

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Seq: BJCH01000009.1 Microcystis aeruginosa NIES-3787 DNA, sequence009, whole genome shotgun sequence (110036 bp)
Overview 1 RT 1: 103283-109411 bp Neighborhood of RT #1 [103283, 109536] TlyC RVT_N RVT-GII GIIM HNHc Dam Feature: gene Location: 103283-104614 bp Feature: domain Description: TlyC Location: 103301-104603 bp Feature: domain Description: TlyC Location: 1 03301 -1 04603 bp Feature: gene Location: 104647-104940 bp Feature: gene Location: 105551-107281 bp Feature: domain Description: RVT_N Location: 105578-105824 bp Feature: domain Description: RVT_N Location: 1 05578-1 05824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105866-106553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05866-1 06553 bp Feature: domain Description: GIIM Note: maturase Location: 106655-106865 bp Feature: domain Description: GIIM Note: maturase Location: 1 06655-1 06865 bp Feature: domain Description: HNHc Note: nucleases Location: 107105-107240 bp Feature: domain Description: HNHc Note: nucleases Location: 1 071 05-1 07240 bp Feature: gene Location: 107576-108343 bp Feature: gene Location: 108643-109536 bp Feature: domain Description: Dam Location: 108676-109411 bp Feature: domain Description: Dam Location: 1 08676-1 0941 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TlyC (COG1253), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Dam (pfam05869)

Seq: BJCH01000015.1 Microcystis aeruginosa NIES-3787 DNA, sequence015, whole genome shotgun sequence (88539 bp)
Overview 1 RT 1: 2474-7344 bp Neighborhood of RT #1 [2474, 7382] InsQ InsQ RVT-GII GIIM McrA RVT_N RVT-GII thioredoxin Feature: gene Location: 2474-3448 bp Feature: domain Description: InsQ Location: 2516-3326 bp Feature: domain Description: InsQ Location: 2 516-332 6 bp Feature: gene Location: 3512-3937 bp Feature: domain Description: InsQ Location: 3614-3890 bp Feature: domain Description: InsQ Location: 3614-3890 bp Feature: gene Location: 3903-4850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3942-4107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3942 -4107 bp Feature: domain Description: GIIM Note: maturase Location: 4206-4440 bp Feature: domain Description: GIIM Note: maturase Location: 42 06-4440 bp Feature: domain Description: McrA Location: 4515-4818 bp Feature: domain Description: McrA Location: 4515-4818 bp Feature: gene Location: 4914-5834 bp Feature: domain Description: RVT_N Location: 4974-5220 bp Feature: domain Description: RVT_N Location: 4974-52 2 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5262-5781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 62 -5781 bp Feature: gene Location: 6453-6629 bp Feature: gene Location: 7026-7382 bp Feature: domain Description: thioredoxin Location: 7050-7344 bp Feature: domain Description: thioredoxin Location: 7050-7344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), thioredoxin (TIGR01068)

Seq: BJCH01000017.1 Microcystis aeruginosa NIES-3787 DNA, sequence017, whole genome shotgun sequence (79716 bp)
Overview 1 RT 1: 1290-5207 bp Neighborhood of RT #1 [1290, 5207] PenP DUF836 RVT_N RVT-GII GIIM McrA Feature: gene Location: 1290-2471 bp Feature: domain Description: PenP Location: 1554-2379 bp Feature: domain Description: PenP Location: 1554-23 79 bp Feature: gene Location: 2475-2741 bp Feature: domain Description: DUF836 Location: 2493-2724 bp Feature: domain Description: DUF83 6 Location: 2493 -2724 bp Feature: gene Location: 2853-4700 bp Feature: domain Description: RVT_N Location: 2919-3162 bp Feature: domain Description: RVT_N Location: 2919-3 162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3207-3876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 207-3 876 bp Feature: domain Description: GIIM Note: maturase Location: 3981-4203 bp Feature: domain Description: GIIM Note: maturase Location: 3 981-4203 bp Feature: domain Description: McrA Location: 4326-4587 bp Feature: domain Description: McrA Location: 43 26-4587 bp Feature: gene Location: 4756-4956 bp Feature: gene Location: 4986-5207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PenP (COG2367), DUF836 (pfam05768), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BJCH01000029.1 Microcystis aeruginosa NIES-3787 DNA, sequence029, whole genome shotgun sequence (48531 bp)
Overview 1 RT 1: 25950-30442 bp Neighborhood of RT #1 [25950, 30442] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Feature: gene Location: 25950-26129 bp Feature: domain Description: Cas2_I_II_III Location: 25956-26094 bp Feature: domain Description: Cas2_I_II_III Location: 25956-26094 bp Feature: gene Location: 26225-27331 bp Feature: domain Description: Cas1_I-II-III Location: 26336-27293 bp Feature: domain Description: Cas1_I-II-III Location: 26336-27293 bp Feature: gene Location: 27334-28311 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 27541-28147 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2754 1-2814 7 bp Feature: gene Location: 28792-29418 bp Feature: gene Location: 30227-30442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: BJCH01000048.1 Microcystis aeruginosa NIES-3787 DNA, sequence048, whole genome shotgun sequence (26469 bp)
Overview 1 RT 1: 10656-16142 bp Neighborhood of RT #1 [10656, 16261] Sbp RVT_N RVT-GII GIIM McrA Uma2 Feature: gene Location: 10656-11738 bp Feature: domain Description: Sbp Location: 10779-11733 bp Feature: domain Description: Sbp Location: 10779-11733 bp Feature: gene Location: 11862-12140 bp Feature: gene Location: 12788-14626 bp Feature: domain Description: RVT_N Location: 12854-13097 bp Feature: domain Description: RVT_N Location: 1285 4-13097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13142-13808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13142-13808 bp Feature: domain Description: GIIM Note: maturase Location: 13907-14129 bp Feature: domain Description: GIIM Note: maturase Location: 13907-14129 bp Feature: domain Description: McrA Location: 14261-14513 bp Feature: domain Description: McrA Location: 14261-145 13 bp Feature: gene Location: 14774-15268 bp Feature: gene Location: 15671-16261 bp Feature: domain Description: Uma2 Location: 15722-16142 bp Feature: domain Description: Uma2 Location: 15 722-16142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sbp (COG3856), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Uma2 (pfam05685)

Seq: BJCH01000054.1 Microcystis aeruginosa NIES-3787 DNA, sequence054, whole genome shotgun sequence (22123 bp)
Overview 1 RT 1: 2-6157 bp Neighborhood of RT #1 [2, 6165] RVT-GII GIIM McrA GH57N_APU_like_1 DUF3536 PLN02618 Feature: gene Location: 2-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56 -725 bp Feature: domain Description: GIIM Note: maturase Location: 830-1052 bp Feature: domain Description: GIIM Note: maturase Location: 830-1052 bp Feature: domain Description: McrA Location: 1184-1436 bp Feature: domain Description: McrA Location: 1184-1436 bp Feature: gene Location: 2006-4672 bp Feature: domain Description: GH57N_APU_like_1 Location: 2192-3191 bp Feature: domain Description: GH57N_APU_like_1 Location: 2192-3191 bp Feature: domain Description: DUF3536 Location: 3212-4058 bp Feature: domain Description: DUF3536 Location: 3212-4058 bp Feature: gene Location: 4918-6165 bp Feature: domain Description: PLN02618 Location: 4948-6157 bp Feature: domain Description: PLN026 18 Location: 4948-6 157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), GH57N_APU_like_1 (cd10797), DUF3536 (pfam12055), PLN02618 (tryptophan synthase, beta chain)

Seq: BJCH01000183.1 Microcystis aeruginosa NIES-3787 DNA, sequence183, whole genome shotgun sequence (412 bp)
Overview 1 RT 1: 2-404 bp Neighborhood of RT #1 [2, 409] RVT-GII Feature: gene Location: 2-409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII