myRT

myRT report for GCA_009812055.1_ASM981205v1

Download annotations/find similar RTs

Seq: WQNH01000014.1 Chelativorans sp. lm93 scaffold14.1-size89074, whole genome shotgun sequence (89074 bp)
Overview 1 RT 1: 18423-22335 bp Neighborhood of RT #1 [18423, 22337] HTH_XRE RVT-GII GIIM TraF Feature: gene Location: 18423-18908 bp Feature: gene Location: 19016-19255 bp Feature: domain Description: HTH_XRE Location: 19043-19196 bp Feature: domain Description: HTH_XRE Location: 1 9043-1 91 96 bp Feature: gene Location: 19591-20922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19882-20545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9882-20545 bp Feature: domain Description: GIIM Note: maturase Location: 20617-20824 bp Feature: domain Description: GIIM Note: maturase Location: 2061 7-20824 bp Feature: gene Location: 21052-21309 bp Feature: gene Location: 22011-22337 bp Feature: domain Description: TraF Location: 22017-22335 bp Feature: domain Description: TraF Location: 2201 7-22335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), TraF (TIGR02739)

Seq: WQNH01000054.1 Chelativorans sp. lm93 scaffold54.1-size26300, whole genome shotgun sequence (26300 bp)
Overview 1 RT 1: 19454-25678 bp Neighborhood of RT #1 [19454, 25678] PRK10815 COG3547 RVT-GII GIIM RimL Feature: gene Location: 19454-20857 bp Feature: domain Description: PRK10815 Location: 20012-20843 bp Feature: domain Description: PRK10815 Location: 2 0012 -2 0843 bp Feature: gene Location: 21208-22215 bp Feature: domain Description: COG3547 Location: 21310-22162 bp Feature: domain Description: COG3547 Location: 2 1310-2 2 162 bp Feature: gene Location: 22303-23823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22609-23371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 609-2 3371 bp Feature: domain Description: GIIM Note: maturase Location: 23443-23656 bp Feature: domain Description: GIIM Note: maturase Location: 2 3443-2 3656 bp Feature: gene Location: 24672-25091 bp Feature: domain Description: RimL Location: 24702-25083 bp Feature: domain Description: RimL Location: 2 4702 -2 5083 bp Feature: gene Location: 25529-25678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10815 (two-component system sensor histidine kinase PhoQ), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), RimL (COG1670)

Seq: WQNH01000009.1 Chelativorans sp. lm93 scaffold9.1-size189003, whole genome shotgun sequence (189003 bp)
Overview 1 RT 1: 136449-144763 bp Neighborhood of RT #1 [136449, 144876] GlcD TPR TOMM_kin_cyc RVT-GII Ugd Feature: gene Location: 136449-137837 bp Feature: domain Description: GlcD Location: 136518-137808 bp Feature: domain Description: GlcD Location: 13 6518-13 7808 bp Feature: gene Location: 137902-141657 bp Feature: domain Description: TPR Location: 138919-139111 bp Feature: domain Description: TPR Location: 13 8919-13 9111 bp Feature: domain Description: TOMM_kin_cyc Location: 139147-141535 bp Feature: domain Description: TOMM_kin_cyc Location: 13 9147-14153 5 bp Feature: gene Location: 141699-142295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142143-142230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142143 -14223 0 bp Feature: gene Location: 142292-143170 bp Feature: gene Location: 143509-144876 bp Feature: domain Description: Ugd Location: 143512-144763 bp Feature: domain Description: Ugd Location: 143 512-144763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlcD (COG0277), TPR (smart00028), TOMM_kin_cyc (TIGR03903), RVT-GII, Ugd (COG1004)