myRT

myRT report for GCA_009820275.1_ASM982027v1

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Seq: VNXQ01000114.1 Escherichia coli strain HH25CH NODE_117_length_446_cov_0.788618, whole genome shotgun sequence (446 bp)
Overview 1 RT 1: 3-444 bp Neighborhood of RT #1 [3, 443] RVT-GII Feature: gene Location: 3-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VNXQ01000001.1 Escherichia coli strain HH25CH NODE_1_length_311712_cov_197.542677, whole genome shotgun sequence (311712 bp)
Overview 1 RT 1: 66097-74560 bp Neighborhood of RT #1 [66097, 74560] LprI RVT-UG7 FRG SR_Res_par HTH_38 RVT-Retrons XRE Feature: gene Location: 66097-66927 bp Feature: domain Description: LprI Location: 66718-66913 bp Feature: domain Description: LprI Location: 66718-66913 bp Feature: gene Location: 66932-67264 bp Feature: gene Location: 67677-69191 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 68049-68472 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 68049-68472 bp Feature: gene Location: 69353-70177 bp Feature: domain Description: FRG Location: 69461-69755 bp Feature: domain Description: FRG Location: 69461-69755 bp Feature: gene Location: 70497-71108 bp Feature: domain Description: SR_Res_par Location: 70512-70944 bp Feature: domain Description: SR_Res_par Location: 70512 -70944 bp Feature: domain Description: HTH_38 Location: 71007-71100 bp Feature: domain Description: HTH_38 Location: 71007-71100 bp Feature: gene Location: 71637-73034 bp Feature: gene Location: 73131-73889 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73137-73650 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73137-73650 bp Feature: gene Location: 74071-74367 bp Feature: domain Description: XRE Location: 74080-74263 bp Feature: domain Description: XRE Location: 74080-742 63 bp Feature: gene Location: 74405-74560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LprI (pfam07007), RVT-UG7, FRG (smart00901), SR_Res_par (cd03767), HTH_38 (pfam13936), RVT-Retrons, XRE (COG1476)