myRT

myRT report for GCA_009820355.1_ASM982035v1

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Seq: VNXU01000013.1 Escherichia coli strain HH24C NODE_13_length_173748_cov_235.184798, whole genome shotgun sequence (173748 bp)
Overview 1 RT 1: 164946-169251 bp Neighborhood of RT #1 [164946, 169251] RVT-UG7 PRK09692 Feature: gene Location: 164946-165086 bp Feature: gene Location: 165196-165936 bp Feature: gene Location: 165933-167561 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 166341-166770 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 66341 -1 66770 bp Feature: gene Location: 167554-168738 bp Feature: domain Description: PRK09692 Location: 167560-168715 bp Feature: domain Description: PRK09692 Location: 1 67560-1 6871 5 bp Feature: gene Location: 169099-169251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)

Seq: VNXU01000039.1 Escherichia coli strain HH24C NODE_39_length_24975_cov_162.462607, whole genome shotgun sequence (24975 bp)
Overview 1 RT 1: 6539-9891 bp Neighborhood of RT #1 [6539, 9893] PinE RVT-GII RVT-GII PHA02517 Feature: gene Location: 6539-7120 bp Feature: domain Description: PinE Location: 6542-7097 bp Feature: domain Description: PinE Location: 6542 -7097 bp Feature: gene Location: 7144-7758 bp Feature: gene Location: 7815-8423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8094-8313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8094-8313 bp Feature: gene Location: 8398-8994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8410-8824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8410-882 4 bp Feature: gene Location: 9031-9345 bp Feature: gene Location: 9522-9893 bp Feature: domain Description: PHA02517 Location: 9525-9891 bp Feature: domain Description: PHA02 517 Location: 952 5-9891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)