myRT

myRT report for GCA_009820635.1_ASM982063v1

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Seq: VNYJ01000037.1 Escherichia coli strain HH17CH NODE_37_length_31539_cov_144.934175, whole genome shotgun sequence (31539 bp)
Overview 1 RT 1: 27988-31176 bp Neighborhood of RT #1 [27988, 31176] PRK10954 RVT-UG4 Feature: gene Location: 27988-28146 bp Feature: gene Location: 28238-28876 bp Feature: domain Description: PRK10954 Location: 28262-28874 bp Feature: domain Description: PRK1 0954 Location: 28262-28874 bp Feature: gene Location: 28884-29855 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 29220-29667 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 29220-29667 bp Feature: gene Location: 29874-30782 bp Feature: gene Location: 30997-31176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10954 (thiol:disulfide interchange protein DsbA), RVT-UG4

Seq: VNYJ01000384.1 Escherichia coli strain HH17CH NODE_386_length_261_cov_0.804348, whole genome shotgun sequence (261 bp)
Overview 1 RT 1: 3-261 bp Neighborhood of RT #1 [3, 260] RVT-UG7 Feature: gene Location: 3-260 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 24-261 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 4-2 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: VNYJ01000051.1 Escherichia coli strain HH17CH NODE_51_length_16337_cov_162.473124, whole genome shotgun sequence (16337 bp)
Overview 1 RT 1: 1246-4429 bp Neighborhood of RT #1 [1246, 4494] PHA02517 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1246-1476 bp Feature: domain Description: PHA02517 Location: 1249-1468 bp Feature: domain Description: PHA02517 Location: 1249-1468 bp Feature: gene Location: 1517-1669 bp Feature: domain Description: PHA02517 Location: 1520-1667 bp Feature: domain Description: PHA02517 Location: 1520-1667 bp Feature: gene Location: 1792-3315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2065-2797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2065-2797 bp Feature: domain Description: GIIM Note: maturase Location: 2872-3070 bp Feature: domain Description: GIIM Note: maturase Location: 2872-3 070 bp Feature: gene Location: 3269-3694 bp Feature: gene Location: 3907-4494 bp Feature: domain Description: PHA02517 Location: 4093-4429 bp Feature: domain Description: PHA02517 Location: 4093 -4429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)