myRT

myRT report for GCA_009820775.1_ASM982077v1

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Seq: VNYR01000017.1 Escherichia coli strain HH15C NODE_41_length_25247_cov_119.130274, whole genome shotgun sequence (25247 bp)
Overview 1 RT 1: 15355-18686 bp Neighborhood of RT #1 [15355, 18709] PHA02517 RVT-GII RVT-GII PinE Feature: gene Location: 15355-15786 bp Feature: domain Description: PHA02517 Location: 15358-15784 bp Feature: domain Description: PHA0251 7 Location: 1 5358-1 5784 bp Feature: gene Location: 15903-16217 bp Feature: gene Location: 16254-16850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16266-16680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6266-1 6680 bp Feature: gene Location: 16825-17433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17104-17323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 04-1 7323 bp Feature: gene Location: 17490-18104 bp Feature: gene Location: 18128-18709 bp Feature: domain Description: PinE Location: 18131-18686 bp Feature: domain Description: PinE Location: 1 81 31 -1 8686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, PinE (COG1961)

Seq: VNYR01000072.1 Escherichia coli strain HH15C NODE_4_length_273682_cov_142.930264, whole genome shotgun sequence (273682 bp)
Overview 1 RT 1: 70614-74127 bp Neighborhood of RT #1 [70614, 74127] YhhI YhhI DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 70614-70919 bp Feature: domain Description: YhhI Location: 70620-70701 bp Feature: domain Description: YhhI Location: 7062 0-70701 bp Feature: domain Description: YhhI Location: 70758-70881 bp Feature: domain Description: YhhI Location: 70758-70881 bp Feature: gene Location: 71024-71197 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 71045-71192 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 71045-71192 bp Feature: gene Location: 71404-72921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71875-72532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71875-72 532 bp Feature: domain Description: GIIM Note: maturase Location: 72616-72826 bp Feature: domain Description: GIIM Note: maturase Location: 72 616-72 82 6 bp Feature: gene Location: 72999-73226 bp Feature: gene Location: 73261-74127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)