myRT

myRT report for GCA_009821085.1_ASM982108v1

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Seq: VNZG01000059.1 Escherichia coli strain HH03C NODE_59_length_6275_cov_188.910294, whole genome shotgun sequence (6275 bp)
Overview 1 RT 1: 1-2313 bp Neighborhood of RT #1 [1, 2381] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C IstB_IS21 Feature: gene Location: 1-177 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7-136 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7-1 36 bp Feature: gene Location: 639-1871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1 494 bp Feature: domain Description: GIIM Note: maturase Location: 1572-1794 bp Feature: domain Description: GIIM Note: maturase Location: 1 572-1 794 bp Feature: gene Location: 1987-2133 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1999-2110 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 999-21 1 0 bp Feature: gene Location: 2214-2381 bp Feature: domain Description: IstB_IS21 Location: 2220-2313 bp Feature: domain Description: IstB_IS21 Location: 2220-231 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), IstB_IS21 (pfam01695)

Seq: VNZG01000060.1 Escherichia coli strain HH03C NODE_61_length_4877_cov_401.052292, whole genome shotgun sequence (4877 bp)
Overview 1 RT 1: 2095-4292 bp Neighborhood of RT #1 [2095, 4292] SlyB RVT-UG4 Feature: gene Location: 2095-2280 bp Feature: gene Location: 2270-2758 bp Feature: domain Description: SlyB Location: 2303-2753 bp Feature: domain Description: SlyB Location: 2 303-2 753 bp Feature: gene Location: 2814-3617 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2991-3438 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 991-3438 bp Feature: gene Location: 3696-3830 bp Feature: gene Location: 3981-4292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SlyB (COG3133), RVT-UG4