myRT

myRT report for GCA_009821165.1_ASM982116v1

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Seq: VDKI01000236.1 Escherichia coli strain G2 NODE_236_length_1085_cov_2.58835, whole genome shotgun sequence (1085 bp)
Overview 1 RT 1: 2-961 bp Neighborhood of RT #1 [2, 1083] RVT-GII YkfC Feature: gene Location: 2-754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-659 bp Feature: gene Location: 754-1083 bp Feature: domain Description: YkfC Location: 760-961 bp Feature: domain Description: YkfC Location: 760-961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YkfC (COG3344)

Seq: VDKI01000072.1 Escherichia coli strain G2 NODE_72_length_8702_cov_128.62, whole genome shotgun sequence (8702 bp)
Overview 1 RT 1: 1045-8406 bp Neighborhood of RT #1 [1045, 8501] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII GIIM Feature: gene Location: 1045-5265 bp Feature: domain Description: PAAR_2 Location: 1051-1132 bp Feature: domain Description: PAAR_2 Location: 1051-1132 bp Feature: domain Description: RhsA Location: 1630-2077 bp Feature: domain Description: RhsA Location: 1630-2 077 bp Feature: domain Description: RHS_repeat Location: 2140-2230 bp Feature: domain Description: RHS_repeat Location: 2 140-2 2 30 bp Feature: domain Description: RhsA Location: 2299-2635 bp Feature: domain Description: RhsA Location: 2 2 99-2 635 bp Feature: domain Description: RhsA Location: 2662-4831 bp Feature: domain Description: RhsA Location: 2 662 -4831 bp Feature: gene Location: 6279-6653 bp Feature: gene Location: 7002-8501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7455-8112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7455-8112 bp Feature: domain Description: GIIM Note: maturase Location: 8196-8406 bp Feature: domain Description: GIIM Note: maturase Location: 8196-8406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388)