myRT

myRT report for GCA_009821555.1_ASM982155v1

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Seq: VDJM01000001.1 Citrobacter braakii strain SC96 NODE_1_length_1059023_cov_89.0522, whole genome shotgun sequence (1059023 bp)
Overview 1 RT 1: 60956-66973 bp Neighborhood of RT #1 [60956, 66978] Ogr_Delta SLATT_5 RVT-UG17 PRK15028 PRK15035 Feature: gene Location: 60956-61228 bp Feature: domain Description: Ogr_Delta Location: 60980-61115 bp Feature: domain Description: Ogr_Delta Location: 60980-61 1 1 5 bp Feature: gene Location: 61609-62340 bp Feature: domain Description: SLATT_5 Location: 61783-62320 bp Feature: domain Description: SLATT_5 Location: 61 783-62320 bp Feature: gene Location: 62340-63677 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62568-63171 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 62568-631 71 bp Feature: gene Location: 64268-65404 bp Feature: domain Description: PRK15028 Location: 64271-65402 bp Feature: domain Description: PRK1 5028 Location: 64271 -65402 bp Feature: gene Location: 65416-66978 bp Feature: domain Description: PRK15035 Location: 65437-66973 bp Feature: domain Description: PRK1 5035 Location: 65437-66973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), SLATT_5 (pfam18160), RVT-UG17, PRK15028 (cytochrome d ubiquinol oxidase subunit II), PRK15035 (cytochrome bd-II oxidase subunit 1; Provisional)

Seq: VDJM01000057.1 Citrobacter braakii strain SC96 NODE_69_length_2688_cov_117.286, whole genome shotgun sequence (2688 bp)
Overview 1 RT 1: 17-2571 bp Neighborhood of RT #1 [17, 2579] RVT-GII GIIM DHFR Feature: gene Location: 17-184 bp Feature: gene Location: 326-544 bp Feature: gene Location: 666-2015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1566 bp Feature: domain Description: GIIM Note: maturase Location: 1614-1818 bp Feature: domain Description: GIIM Note: maturase Location: 1614-1818 bp Feature: gene Location: 2097-2579 bp Feature: domain Description: DHFR Location: 2115-2571 bp Feature: domain Description: DHFR Location: 2 115-2 571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DHFR (cl17279)