myRT

myRT report for GCA_009821875.1_ASM982187v1

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Seq: VDIW01000018.1 Klebsiella pneumoniae strain HuB74 NODE_18_length_114066_cov_120.945, whole genome shotgun sequence (114066 bp)
Overview 1 RT 1: 31746-38599 bp Neighborhood of RT #1 [31746, 38616] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31746-32411 bp Feature: domain Description: INT_P4_C Location: 31851-32409 bp Feature: domain Description: INT_P4_C Location: 31 851 -32409 bp Feature: gene Location: 32672-33112 bp Feature: domain Description: Integrase_1 Location: 32678-32894 bp Feature: domain Description: Integrase_1 Location: 32678-32894 bp Feature: gene Location: 33169-35247 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33577-34021 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33577-34021 bp Feature: gene Location: 35247-37856 bp Feature: domain Description: FimD Location: 35304-37845 bp Feature: domain Description: FimD Location: 35304-37845 bp Feature: gene Location: 37888-38616 bp Feature: domain Description: FimC Location: 37936-38599 bp Feature: domain Description: FimC Location: 37936-38599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VDIW01000032.1 Klebsiella pneumoniae strain HuB74 NODE_34_length_28372_cov_63.1052, whole genome shotgun sequence (28372 bp)
Overview 1 RT 1: 10408-14804 bp Neighborhood of RT #1 [10408, 14804] umuC PRK10276 RVT-GII Feature: gene Location: 10408-11679 bp Feature: domain Description: umuC Location: 10411-11671 bp Feature: domain Description: umuC Location: 10411-11671 bp Feature: gene Location: 11679-12362 bp Feature: domain Description: PRK10276 Location: 11982-12345 bp Feature: domain Description: PRK102 76 Location: 11982 -12 345 bp Feature: gene Location: 12516-14003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12921-13611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 92 1-13611 bp Feature: gene Location: 14237-14467 bp Feature: gene Location: 14526-14804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII