myRT

myRT report for GCA_009821895.1_ASM982189v1

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Seq: VDIV01000057.1 Escherichia coli strain SCcd73 NODE_57_length_25393_cov_103.401, whole genome shotgun sequence (25393 bp)
Overview 1 RT 1: 2-4774 bp Neighborhood of RT #1 [2, 4791] PRK09692 RVT-UG7 Psu Feature: gene Location: 2-244 bp Feature: gene Location: 374-1558 bp Feature: domain Description: PRK09692 Location: 380-1535 bp Feature: domain Description: PRK09692 Location: 380-1 535 bp Feature: gene Location: 1551-3179 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1959-2388 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 959-2388 bp Feature: gene Location: 3176-3916 bp Feature: gene Location: 4219-4791 bp Feature: domain Description: Psu Location: 4237-4774 bp Feature: domain Description: Psu Location: 4237-4774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: VDIV01000069.1 Escherichia coli strain SCcd73 NODE_76_length_15896_cov_113.234, whole genome shotgun sequence (15896 bp)
Overview 1 RT 1: 10217-13928 bp Neighborhood of RT #1 [10217, 14191] Resolvase RVT-Retrons HTH_XRE Feature: gene Location: 10217-10882 bp Feature: domain Description: Resolvase Location: 10238-10655 bp Feature: domain Description: Resolvase Location: 102 38-10655 bp Feature: gene Location: 10931-11113 bp Feature: gene Location: 11150-12856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11300-11897 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11300-11897 bp Feature: gene Location: 12993-13490 bp Feature: gene Location: 13730-14191 bp Feature: domain Description: HTH_XRE Location: 13760-13928 bp Feature: domain Description: HTH_XRE Location: 13760-1392 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-Retrons, HTH_XRE (smart00530)