myRT

myRT report for GCA_009821935.1_ASM982193v1

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Seq: VDIT01000021.1 Klebsiella pneumoniae strain SCcd71 NODE_21_length_113132_cov_149.4, whole genome shotgun sequence (113132 bp)
Overview 1 RT 1: 105574-112442 bp Neighborhood of RT #1 [105574, 112444] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 105574-106302 bp Feature: domain Description: FimC Location: 105622-106285 bp Feature: domain Description: FimC Location: 1 05622-1 06285 bp Feature: gene Location: 106334-108943 bp Feature: domain Description: FimD Location: 106391-108932 bp Feature: domain Description: FimD Location: 1 06391 -1 08932 bp Feature: gene Location: 108943-111021 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 109351-109795 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 09351 -1 09795 bp Feature: gene Location: 111078-111518 bp Feature: domain Description: Integrase_1 Location: 111084-111300 bp Feature: domain Description: Integrase_1 Location: 1 1 1 084-1 1 1 300 bp Feature: gene Location: 111779-112444 bp Feature: domain Description: INT_P4_C Location: 111884-112442 bp Feature: domain Description: INT_P4_C Location: 1 1 1 884-1 1 2442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: VDIT01000005.1 Klebsiella pneumoniae strain SCcd71 NODE_5_length_275394_cov_127.558, whole genome shotgun sequence (275394 bp)
Overview 1 RT 1: 345-2518 bp Neighborhood of RT #1 [345, 2682] RVT-GII PRK10276 Feature: gene Location: 345-578 bp Feature: gene Location: 629-2116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-172 4 bp Feature: gene Location: 2193-2354 bp Feature: gene Location: 2311-2682 bp Feature: domain Description: PRK10276 Location: 2356-2518 bp Feature: domain Description: PRK102 76 Location: 2 356-2 518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)