myRT

myRT report for GCA_009822265.1_ASM982226v1

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Seq: VDID01000025.1 Escherichia coli strain SCsl20 NODE_25_length_65837_cov_143.614, whole genome shotgun sequence (65837 bp)
Overview 1 RT 1: 21965-25848 bp Neighborhood of RT #1 [21965, 25853] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 21965-22681 bp Feature: domain Description: rph Location: 21968-22676 bp Feature: domain Description: rph Location: 21 968-22676 bp Feature: gene Location: 22733-23389 bp Feature: domain Description: pyrE Location: 22751-23384 bp Feature: domain Description: pyrE Location: 22751 -23384 bp Feature: gene Location: 23687-24646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23822-24371 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23822-24371 bp Feature: gene Location: 24692-25288 bp Feature: domain Description: slmA Location: 24698-25274 bp Feature: domain Description: slmA Location: 24698-25274 bp Feature: gene Location: 25395-25853 bp Feature: domain Description: dut Location: 25401-25848 bp Feature: domain Description: dut Location: 25401 -25848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: VDID01000045.1 Escherichia coli strain SCsl20 NODE_45_length_18967_cov_139.025, whole genome shotgun sequence (18967 bp)
Overview 1 RT 1: 181-2692 bp Neighborhood of RT #1 [181, 2692] RVT-UG17 SLATT_5 Feature: gene Location: 181-318 bp Feature: gene Location: 334-468 bp Feature: gene Location: 576-1946 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 804-1410 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 804-1410 bp Feature: gene Location: 1924-2475 bp Feature: domain Description: SLATT_5 Location: 1930-2446 bp Feature: domain Description: SLATT_5 Location: 1930-2 446 bp Feature: gene Location: 2513-2692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)