myRT

myRT report for GCA_009822415.1_ASM982241v1

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Seq: VDHW01000002.1 Klebsiella pneumoniae strain SCsl11 NODE_2_length_320144_cov_124.456, whole genome shotgun sequence (320144 bp)
Overview 1 RT 1: 47917-54770 bp Neighborhood of RT #1 [47917, 54787] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 47917-48582 bp Feature: domain Description: INT_P4_C Location: 48022-48580 bp Feature: domain Description: INT_P4_C Location: 48022-48580 bp Feature: gene Location: 48843-49283 bp Feature: domain Description: Integrase_1 Location: 48849-49065 bp Feature: domain Description: Integrase_1 Location: 48849-49065 bp Feature: gene Location: 49340-51418 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49748-50192 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49748-501 92 bp Feature: gene Location: 51418-54027 bp Feature: domain Description: FimD Location: 51475-54016 bp Feature: domain Description: FimD Location: 51 475-5401 6 bp Feature: gene Location: 54059-54787 bp Feature: domain Description: FimC Location: 54092-54770 bp Feature: domain Description: FimC Location: 54092-54770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VDHW01000032.1 Klebsiella pneumoniae strain SCsl11 NODE_32_length_24546_cov_144.909, whole genome shotgun sequence (24546 bp)
Overview 1 RT 1: 13937-18962 bp Neighborhood of RT #1 [13937, 18967] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 13937-15208 bp Feature: domain Description: umuC Location: 13940-15200 bp Feature: domain Description: umuC Location: 13940-152 00 bp Feature: gene Location: 15208-16020 bp Feature: domain Description: PRK10276 Location: 15640-16003 bp Feature: domain Description: PRK102 76 Location: 15640-16003 bp Feature: gene Location: 16045-17532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16450-17140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16450-17140 bp Feature: gene Location: 17601-17870 bp Feature: gene Location: 18002-18967 bp Feature: domain Description: ArdC Location: 18128-18962 bp Feature: domain Description: ArdC Location: 1812 8-18962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)