myRT

myRT report for GCA_009822765.1_ASM982276v1

Download annotations/find similar RTs

Seq: VDLN01000022.1 Escherichia coli strain G54 NODE_22_length_75185_cov_130.344, whole genome shotgun sequence (75185 bp)
Overview 1 RT 1: 49333-53216 bp Neighborhood of RT #1 [49333, 53221] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49333-49791 bp Feature: domain Description: dut Location: 49339-49786 bp Feature: domain Description: dut Location: 49339-49786 bp Feature: gene Location: 49898-50494 bp Feature: domain Description: slmA Location: 49904-50480 bp Feature: domain Description: slmA Location: 49904-50480 bp Feature: gene Location: 50540-51499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50675-51224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50675-51 224 bp Feature: gene Location: 51797-52453 bp Feature: domain Description: pyrE Location: 51815-52448 bp Feature: domain Description: pyrE Location: 51 81 5-52448 bp Feature: gene Location: 52505-53221 bp Feature: domain Description: rph Location: 52508-53216 bp Feature: domain Description: rph Location: 52508-5321 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: VDLN01000056.1 Escherichia coli strain G54 NODE_56_length_19688_cov_130.378, whole genome shotgun sequence (19688 bp)
Overview 1 RT 1: 902-3413 bp Neighborhood of RT #1 [902, 3413] RVT-UG17 SLATT_5 Feature: gene Location: 902-1039 bp Feature: gene Location: 1055-1189 bp Feature: gene Location: 1297-2667 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1525-2131 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 152 5-2 131 bp Feature: gene Location: 2645-3196 bp Feature: domain Description: SLATT_5 Location: 2651-3167 bp Feature: domain Description: SLATT_5 Location: 2 651-3167 bp Feature: gene Location: 3234-3413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)