myRT

myRT report for GCA_009823015.1_ASM982301v1

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Seq: VDLD01000005.1 Escherichia coli strain G44 NODE_5_length_277644_cov_93.9094, whole genome shotgun sequence (277644 bp)
Overview 1 RT 1: 273912-276878 bp Neighborhood of RT #1 [273912, 277075] SLATT_5 RVT-UG17 DUF4094 Peptidase_S74 Feature: gene Location: 273912-274052 bp Feature: gene Location: 274066-274608 bp Feature: domain Description: SLATT_5 Location: 274072-274588 bp Feature: domain Description: SLATT_5 Location: 274072-274588 bp Feature: gene Location: 274595-275965 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 274823-275429 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 274823-275429 bp Feature: gene Location: 276073-276360 bp Feature: gene Location: 276371-277075 bp Feature: domain Description: DUF4094 Location: 276413-276503 bp Feature: domain Description: DUF4094 Location: 27641 3-276503 bp Feature: domain Description: Peptidase_S74 Location: 276719-276878 bp Feature: domain Description: Peptidase_S74 Location: 27671 9-276878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, DUF4094 (pfam13334), Peptidase_S74 (pfam13884)

Seq: VDLD01000006.1 Escherichia coli strain G44 NODE_6_length_267827_cov_71.5178, whole genome shotgun sequence (267827 bp)
Overview 1 RT 1: 50021-53962 bp Neighborhood of RT #1 [50021, 53962] RVT-Retrons Feature: gene Location: 50021-50260 bp Feature: gene Location: 50567-50743 bp Feature: gene Location: 50816-52588 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50975-51593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50975-51593 bp Feature: gene Location: 52610-52777 bp Feature: gene Location: 52823-53962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: VDLD01000007.1 Escherichia coli strain G44 NODE_7_length_233446_cov_97.1753, whole genome shotgun sequence (233446 bp)
Overview 1 RT 1: 212942-218744 bp Neighborhood of RT #1 [212942, 218744] LacY_symp SacC RVT-GII GIIM PHA02517 Feature: gene Location: 212942-214219 bp Feature: domain Description: LacY_symp Location: 212957-214166 bp Feature: domain Description: LacY_symp Location: 212957-214166 bp Feature: gene Location: 214216-215646 bp Feature: domain Description: SacC Location: 214237-215638 bp Feature: domain Description: SacC Location: 21423 7-21563 8 bp Feature: gene Location: 216271-217794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216544-217276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216544-217276 bp Feature: domain Description: GIIM Note: maturase Location: 217351-217549 bp Feature: domain Description: GIIM Note: maturase Location: 2173 51-217549 bp Feature: gene Location: 217959-218363 bp Feature: domain Description: PHA02517 Location: 217962-218352 bp Feature: domain Description: PHA02517 Location: 217962-2183 52 bp Feature: gene Location: 218538-218744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacY_symp (pfam01306), SacC (COG1621), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)