myRT

myRT report for GCA_009823155.1_ASM982315v1

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Seq: VDKU01000029.1 Escherichia coli strain G36 NODE_29_length_44431_cov_114.298, whole genome shotgun sequence (44431 bp)
Overview 1 RT 1: 3918-9197 bp Neighborhood of RT #1 [3918, 9313] RVT-UG7 PRK09692 Phage_int_SAM_5 INT_C_like_1 Feature: gene Location: 3918-4058 bp Feature: gene Location: 4168-4908 bp Feature: gene Location: 4905-6533 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5313-5742 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 531 3-5742 bp Feature: gene Location: 6526-7710 bp Feature: domain Description: PRK09692 Location: 6532-7687 bp Feature: domain Description: PRK09692 Location: 6532-7687 bp Feature: gene Location: 8036-9313 bp Feature: domain Description: Phage_int_SAM_5 Location: 8348-8585 bp Feature: domain Description: Phage_int_SAM_5 Location: 8348-8585 bp Feature: domain Description: INT_C_like_1 Location: 8681-9197 bp Feature: domain Description: INT_C_like_1 Location: 8681 -91 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)

Seq: VDKU01000051.1 Escherichia coli strain G36 NODE_51_length_16098_cov_100.088, whole genome shotgun sequence (16098 bp)
Overview 1 RT 1: 2236-6236 bp Neighborhood of RT #1 [2236, 6244] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2236-3597 bp Feature: domain Description: DcuC Location: 2239-3571 bp Feature: domain Description: DcuC Location: 2 2 39-3571 bp Feature: gene Location: 3650-4021 bp Feature: gene Location: 4243-4689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549-4651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549-4651 bp Feature: gene Location: 4737-4886 bp Feature: gene Location: 5213-6244 bp Feature: domain Description: Asparaginase_2 Location: 5303-6236 bp Feature: domain Description: Asparaginase_2 Location: 5303-62 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)