myRT

myRT report for GCA_009823595.1_ASM982359v1

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Seq: WUJG01000010.1 Sphaerochaeta halotolerans strain 585 NODE_10_length_133793, whole genome shotgun sequence (133793 bp)
Overview 1 RT 1: 9325-14723 bp 2 RT 2: 21583-26657 bp Neighborhood of RT #1 [9325, 14723] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #2 [21583, 26752] PRK06526 COG4584 RVT-GII DDE_Tnp_1 Feature: gene Location: 9325-10491 bp Feature: domain Description: DDE_Tnp_1 Location: 9772-10396 bp Feature: domain Description: DDE_Tnp_1 Location: 9772-1 0396 bp Feature: gene Location: 10734-10862 bp Feature: gene Location: 11088-12638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11451-12069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 451 -1 2069 bp Feature: domain Description: GIIM Note: maturase Location: 12141-12369 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 41 -1 2369 bp Feature: gene Location: 12813-14384 bp Feature: gene Location: 14496-14723 bp Feature: gene Location: 21583-22359 bp Feature: domain Description: PRK06526 Location: 21664-22315 bp Feature: domain Description: PRK06526 Location: 21 664-2231 5 bp Feature: gene Location: 22356-23813 bp Feature: domain Description: COG4584 Location: 22365-23190 bp Feature: domain Description: COG4584 Location: 22365-231 90 bp Feature: gene Location: 24021-25286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24270-24933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24270-24933 bp Feature: gene Location: 25317-25574 bp Feature: gene Location: 25586-26752 bp Feature: domain Description: DDE_Tnp_1 Location: 26033-26657 bp Feature: domain Description: DDE_Tnp_1 Location: 26033-26657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), PRK06526 (transposase; Provisional), COG4584 (Transposase )

Seq: WUJG01000011.1 Sphaerochaeta halotolerans strain 585 NODE_11_length_126545, whole genome shotgun sequence (126545 bp)
Overview 1 RT 1: 122443-126544 bp Neighborhood of RT #1 [122443, 126544] MetP AbcC RVT-GII GIIM Feature: gene Location: 122443-123105 bp Feature: domain Description: MetP Location: 122452-123091 bp Feature: domain Description: MetP Location: 12 2 452 -12 3091 bp Feature: gene Location: 123102-124145 bp Feature: domain Description: AbcC Location: 123138-124131 bp Feature: domain Description: AbcC Location: 12 3138-12 4131 bp Feature: gene Location: 124356-125819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124632-125247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 4632 -12 52 47 bp Feature: domain Description: GIIM Note: maturase Location: 125316-125547 bp Feature: domain Description: GIIM Note: maturase Location: 12 5316-12 5547 bp Feature: gene Location: 126065-126544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetP (COG2011), AbcC (COG1135), RVT-GII, GIIM (pfam08388)

Seq: WUJG01000022.1 Sphaerochaeta halotolerans strain 585 NODE_22_length_23484, whole genome shotgun sequence (23484 bp)
Overview 1 RT 1: 19627-23111 bp Neighborhood of RT #1 [19627, 23443] DUF262 DUF262 RVT-GII S14_ClpP_1 Feature: gene Location: 19627-20844 bp Feature: domain Description: DUF262 Location: 19825-20029 bp Feature: domain Description: DUF262 Location: 19825-20029 bp Feature: domain Description: DUF262 Location: 20104-20239 bp Feature: domain Description: DUF262 Location: 20104-2023 9 bp Feature: gene Location: 20841-21428 bp Feature: gene Location: 21622-22104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21745-22024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21745-22024 bp Feature: gene Location: 22769-23443 bp Feature: domain Description: S14_ClpP_1 Location: 22889-23111 bp Feature: domain Description: S14_ClpP_1 Location: 22889-23 111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), RVT-GII, S14_ClpP_1 (cd07016)