myRT

myRT report for GCA_009826295.1_ASM982629v1

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Seq: WULJ01000023.1 Klebsiella pneumoniae strain 0404023 NODE_23_length_62399_cov_75.797, whole genome shotgun sequence (62399 bp)
Overview 1 RT 1: 8921-14466 bp Neighborhood of RT #1 [8921, 14477] RVT-GII GIIM KOG2108 KOG2108 KOG2108 ICE_TraI_Pfluor TraI_2_C Feature: gene Location: 8921-9148 bp Feature: gene Location: 9165-9344 bp Feature: gene Location: 9770-11155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10097-10715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0097-1 071 5 bp Feature: domain Description: GIIM Note: maturase Location: 10769-10994 bp Feature: domain Description: GIIM Note: maturase Location: 1 0769-1 0994 bp Feature: gene Location: 11316-12791 bp Feature: domain Description: KOG2108 Location: 11373-11544 bp Feature: domain Description: KOG21 08 Location: 1 1 373-1 1 544 bp Feature: domain Description: KOG2108 Location: 11805-12117 bp Feature: domain Description: KOG21 08 Location: 1 1 805-1 21 1 7 bp Feature: domain Description: KOG2108 Location: 12414-12687 bp Feature: domain Description: KOG21 08 Location: 1 241 4-1 2687 bp Feature: gene Location: 12858-14477 bp Feature: domain Description: ICE_TraI_Pfluor Location: 12948-13575 bp Feature: domain Description: ICE_TraI_Pfluor Location: 1 2948-1 3575 bp Feature: domain Description: TraI_2_C Location: 14118-14466 bp Feature: domain Description: TraI_2_C Location: 1 41 1 8-1 4466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2108 (KOG2108, 3'-5' DNA helicase ), ICE_TraI_Pfluor (TIGR03760), TraI_2_C (pfam07515), RVT-GII, GIIM (pfam08388)

Seq: WULJ01000026.1 Klebsiella pneumoniae strain 0404023 NODE_26_length_44943_cov_74.6742, whole genome shotgun sequence (44943 bp)
Overview 1 RT 1: 15873-19143 bp Neighborhood of RT #1 [15873, 19157] RVT-GII PRK10276 Feature: gene Location: 15873-16088 bp Feature: gene Location: 16355-16585 bp Feature: gene Location: 16819-18330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17224-17938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 2 4-17938 bp Feature: gene Location: 18381-18614 bp Feature: gene Location: 18732-19157 bp Feature: domain Description: PRK10276 Location: 18735-19143 bp Feature: domain Description: PRK102 76 Location: 18735-19143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: WULJ01000036.1 Klebsiella pneumoniae strain 0404023 NODE_36_length_15020_cov_71.6366, whole genome shotgun sequence (15020 bp)
Overview 1 RT 1: 3354-13074 bp Neighborhood of RT #1 [3354, 13094] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 3354-4544 bp Feature: domain Description: AAA_13 Location: 3423-3645 bp Feature: domain Description: AAA_13 Location: 3 423 -3 645 bp Feature: domain Description: AAA_13 Location: 3825-4239 bp Feature: domain Description: AAA_13 Location: 3 825-423 9 bp Feature: gene Location: 4537-7656 bp Feature: domain Description: COG0610 Location: 4621-7633 bp Feature: domain Description: COG0610 Location: 4621-763 3 bp Feature: gene Location: 8198-9298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8339-8903 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83 3 9-8903 bp Feature: gene Location: 9471-11612 bp Feature: domain Description: AAA_15 Location: 9498-9915 bp Feature: domain Description: AAA_15 Location: 9498-9915 bp Feature: domain Description: AAA_15 Location: 10059-10479 bp Feature: domain Description: AAA_15 Location: 10059-10479 bp Feature: gene Location: 12162-13094 bp Feature: domain Description: COG2958 Location: 12180-13074 bp Feature: domain Description: COG2958 Location: 12180-13 074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175)