myRT

myRT report for GCA_009826695.1_ASM982669v1

Download annotations/find similar RTs

Seq: WUMA01000012.1 Klebsiella pneumoniae strain 1711078 NODE_12_length_142209_cov_140.61, whole genome shotgun sequence (142209 bp)
Overview 1 RT 1: 113560-116634 bp Neighborhood of RT #1 [113560, 116639] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 113560-113778 bp Feature: domain Description: PRK09678 Location: 113563-113761 bp Feature: domain Description: PRK09678 Location: 1 1 3563-1 1 3761 bp Feature: gene Location: 114025-114213 bp Feature: gene Location: 114182-114955 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 114317-114770 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 1 431 7-1 1 4770 bp Feature: gene Location: 115570-116052 bp Feature: domain Description: SmpB Location: 115600-116044 bp Feature: domain Description: SmpB Location: 1 1 5600-1 1 6044 bp Feature: gene Location: 116163-116639 bp Feature: domain Description: PRK10724 Location: 116169-116634 bp Feature: domain Description: PRK1 0724 Location: 1 1 61 69-1 1 6634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: WUMA01000051.1 Klebsiella pneumoniae strain 1711078 NODE_51_length_7836_cov_261.627, whole genome shotgun sequence (7836 bp)
Overview 1 RT 1: 3535-7831 bp Neighborhood of RT #1 [3535, 7833] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 3535-3837 bp Feature: domain Description: InsE Location: 3544-3826 bp Feature: domain Description: InsE Location: 3544-382 6 bp Feature: gene Location: 3864-4289 bp Feature: domain Description: PHA02517 Location: 3888-4224 bp Feature: domain Description: PHA02 517 Location: 3888-42 2 4 bp Feature: gene Location: 4881-6404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5154-5886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5154-5886 bp Feature: domain Description: GIIM Note: maturase Location: 5961-6159 bp Feature: domain Description: GIIM Note: maturase Location: 5961-6159 bp Feature: gene Location: 6569-6727 bp Feature: domain Description: PHA02517 Location: 6572-6692 bp Feature: domain Description: PHA02 517 Location: 6572 -6692 bp Feature: gene Location: 6946-7833 bp Feature: domain Description: COG3547 Location: 6985-7831 bp Feature: domain Description: COG3547 Location: 6985-7831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: WUMA01000086.1 Klebsiella pneumoniae strain 1711078 NODE_86_length_1894_cov_601.093, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII