myRT

myRT report for GCA_009828885.1_ASM982888v1

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Seq: WURL01000021.1 Proteus cibarius strain 17SZ8RZ8EW RZ8EW_21_length_33026_cov_102.899, whole genome shotgun sequence (33026 bp)
Overview 1 RT 1: 27154-32574 bp Neighborhood of RT #1 [27154, 32591] AAA_15 AAA_15 RVT-Retrons PRK07006 INT_Lambda_C Feature: gene Location: 27154-27795 bp Feature: gene Location: 28192-30312 bp Feature: domain Description: AAA_15 Location: 28195-28555 bp Feature: domain Description: AAA_1 5 Location: 281 95-28555 bp Feature: domain Description: AAA_15 Location: 28750-29179 bp Feature: domain Description: AAA_1 5 Location: 28750-291 79 bp Feature: gene Location: 30485-31585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30626-31190 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30626-31 1 90 bp Feature: gene Location: 32156-32329 bp Feature: domain Description: PRK07006 Location: 32165-32327 bp Feature: domain Description: PRK07006 Location: 321 65-32327 bp Feature: gene Location: 32439-32591 bp Feature: domain Description: INT_Lambda_C Location: 32493-32574 bp Feature: domain Description: INT_Lambda_C Location: 32493-32574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, PRK07006 (isocitrate dehydrogenase; Reviewed), INT_Lambda_C (cd00800)

Seq: WURL01000027.1 Proteus cibarius strain 17SZ8RZ8EW RZ8EW_27_length_15957_cov_115.513, whole genome shotgun sequence (15957 bp)
Overview 1 RT 1: 2252-12033 bp Neighborhood of RT #1 [2252, 12041] DUF45 COG0610 RVT-UG5 RMtype1_S_AbaB8300I-TRD1-CR1_like RMtype1_S_AbaB8300I-TRD1-CR1_like HsdM Feature: gene Location: 2252-3001 bp Feature: domain Description: DUF45 Location: 2357-2975 bp Feature: domain Description: DUF45 Location: 2 357-2 975 bp Feature: gene Location: 3016-6297 bp Feature: domain Description: COG0610 Location: 3043-6130 bp Feature: domain Description: COG0610 Location: 3043-6130 bp Feature: gene Location: 6341-9280 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6830-7286 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6830-72 86 bp Feature: gene Location: 9293-10393 bp Feature: domain Description: RMtype1_S_AbaB8300I-TRD1-CR1_like Location: 9296-9737 bp Feature: domain Description: RMtype1_S_AbaB8300I-TRD1-CR1_like Location: 92 96-9737 bp Feature: domain Description: RMtype1_S_AbaB8300I-TRD1-CR1_like Location: 10088-10367 bp Feature: domain Description: RMtype1_S_AbaB8300I-TRD1-CR1_like Location: 10088-10367 bp Feature: gene Location: 10497-12041 bp Feature: domain Description: HsdM Location: 10533-12033 bp Feature: domain Description: HsdM Location: 10533-12 033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5, RMtype1_S_AbaB8300I-TRD1-CR1_like (cd17263), HsdM (COG0286)

Seq: WURL01000030.1 Proteus cibarius strain 17SZ8RZ8EW RZ8EW_30_length_4562_cov_293.068, whole genome shotgun sequence (4562 bp)
Overview 1 RT 1: 91-2591 bp Neighborhood of RT #1 [91, 2591] RVT-Retrons Feature: gene Location: 91-1041 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 253-787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 253 -787 bp Feature: gene Location: 1706-2017 bp Feature: gene Location: 2412-2591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons