myRT

myRT report for GCA_009828925.1_ASM982892v1

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Seq: WUTY01000105.1 Methylicorpusculum oleiharenae strain XLMV4 draft_NODE_117_len_73134_cov_556_719116.105, whole genome shotgun sequence (73228 bp)
Overview 1 RT 1: 43209-57861 bp Neighborhood of RT #1 [43209, 58448] NACHT RVT-UG5 PLDc_N_DEXD_a DEXDc_RapA SF2_C_SNF COG1743 COG1743 Feature: gene Location: 43209-43370 bp Feature: gene Location: 44004-48971 bp Feature: domain Description: NACHT Location: 44139-44631 bp Feature: domain Description: NACHT Location: 441 39-44631 bp Feature: gene Location: 49356-52601 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 49890-50385 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 49890-50385 bp Feature: gene Location: 52890-55607 bp Feature: domain Description: PLDc_N_DEXD_a Location: 52905-53418 bp Feature: domain Description: PLDc_N_DEXD_a Location: 52905-5341 8 bp Feature: domain Description: DEXDc_RapA Location: 53565-54267 bp Feature: domain Description: DEXDc_RapA Location: 53565-54267 bp Feature: domain Description: SF2_C_SNF Location: 54780-55296 bp Feature: domain Description: SF2_C_SNF Location: 54780-55296 bp Feature: gene Location: 55611-58448 bp Feature: domain Description: COG1743 Location: 55647-56970 bp Feature: domain Description: COG1 743 Location: 55647-56970 bp Feature: domain Description: COG1743 Location: 57015-57861 bp Feature: domain Description: COG1 743 Location: 5701 5-57861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NACHT (pfam05729), RVT-UG5, PLDc_N_DEXD_a (cd09179), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), COG1743 (Adenine-specific DNA methylase, contains a Zn-ribbon domain )

Seq: WUTY01000124.1 Methylicorpusculum oleiharenae strain XLMV4 draft_NODE_143_len_682_cov_764_324036.124, whole genome shotgun sequence (776 bp)
Overview 1 RT 1: 3-474 bp Neighborhood of RT #1 [3, 473] RVT-GII Feature: gene Location: 3-473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WUTY01000205.1 Methylicorpusculum oleiharenae strain XLMV4 draft_NODE_253_len_725_cov_365_183441.205, whole genome shotgun sequence (819 bp)
Overview 1 RT 1: 3-810 bp Neighborhood of RT #1 [3, 818] RVT-GII GIIM Feature: gene Location: 3-818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-594 bp Feature: domain Description: GIIM Note: maturase Location: 636-810 bp Feature: domain Description: GIIM Note: maturase Location: 63 6-810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WUTY01000291.1 Methylicorpusculum oleiharenae strain XLMV4 draft_NODE_405_len_2972_cov_336_952545.291, whole genome shotgun sequence (3066 bp)
Overview 1 RT 1: 3-3057 bp Neighborhood of RT #1 [3, 3065] RVT-GII Resolvase Recombinase Zn_ribbon_recom ANTAR arc_metj RVT-CRISPR-like GIIM Feature: gene Location: 3-188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-174 bp Feature: gene Location: 221-2017 bp Feature: domain Description: Resolvase Location: 233-674 bp Feature: domain Description: Resolvase Location: 233-674 bp Feature: domain Description: Recombinase Location: 761-1121 bp Feature: domain Description: Recombinase Location: 761-1121 bp Feature: domain Description: Zn_ribbon_recom Location: 1160-1349 bp Feature: domain Description: Zn_ribbon_recom Location: 1160-134 9 bp Feature: gene Location: 2161-2490 bp Feature: domain Description: ANTAR Location: 2242-2311 bp Feature: domain Description: ANTAR Location: 224 2-2311 bp Feature: domain Description: arc_metj Location: 2362-2470 bp Feature: domain Description: arc_metj Location: 2362-24 70 bp Feature: gene Location: 2556-3065 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2598-2835 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2598-2835 bp Feature: domain Description: GIIM Note: maturase Location: 2883-3057 bp Feature: domain Description: GIIM Note: maturase Location: 2883-3057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), ANTAR (smart01012), arc_metj (LOAD_arc_metj), RVT-CRISPR, GIIM (pfam08388)