myRT

myRT report for GCA_009828985.1_ASM982898v1

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Seq: WURO01000027.1 Acinetobacter johnsonii strain 18QD2AZ57W 139_27_length_34489_cov_205.816, whole genome shotgun sequence (34489 bp)
Overview 1 RT 1: 30063-34466 bp Neighborhood of RT #1 [30063, 34486] HTH_XRE RVT_N RVT-GII GIIM DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 30063-30302 bp Feature: domain Description: HTH_XRE Location: 30072-30204 bp Feature: domain Description: HTH_XRE Location: 30072-30204 bp Feature: gene Location: 30306-30494 bp Feature: gene Location: 30813-32489 bp Feature: RT Description: RVT_N Location: 30873-31116 bp Feature: RT Description: RVT_N Location: 30873-31 1 1 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31161-31797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 61 -31 797 bp Feature: domain Description: GIIM Note: maturase Location: 31851-32082 bp Feature: domain Description: GIIM Note: maturase Location: 31 851 -32082 bp Feature: gene Location: 33029-34486 bp Feature: domain Description: DUF3287 Location: 33062-33227 bp Feature: domain Description: DUF3287 Location: 33062-33227 bp Feature: domain Description: LZ_Tnp_IS66 Location: 33257-33482 bp Feature: domain Description: LZ_Tnp_IS66 Location: 33257-33482 bp Feature: domain Description: zf-IS66 Location: 33506-33632 bp Feature: domain Description: zf-IS66 Location: 33506-33632 bp Feature: domain Description: DDE_Tnp_IS66 Location: 33674-34466 bp Feature: domain Description: DDE_Tnp_IS66 Location: 33674-34466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: WURO01000008.1 Acinetobacter johnsonii strain 18QD2AZ57W 139_8_length_158608_cov_130.342, whole genome shotgun sequence (158608 bp)
Overview 1 RT 1: 130480-135013 bp Neighborhood of RT #1 [130480, 135183] RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 130480-131001 bp Feature: gene Location: 131301-131690 bp Feature: gene Location: 132016-132963 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132136-132730 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 136-132 730 bp Feature: gene Location: 132965-134527 bp Feature: domain Description: COG3950 Location: 133136-134462 bp Feature: domain Description: COG3950 Location: 133136-134462 bp Feature: gene Location: 134530-135183 bp Feature: domain Description: TIGR02646 Location: 134605-135013 bp Feature: domain Description: TIGR02 646 Location: 134605-135013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)