myRT

myRT report for GCA_009829085.1_ASM982908v1

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Seq: WUQY01000124.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_128, whole genome shotgun sequence (503 bp)
Overview 1 RT 1: 2-464 bp Neighborhood of RT #1 [2, 502] RVT-UG17 Feature: gene Location: 2-502 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 371-464 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 371 -464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: WUQY01000181.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_205, whole genome shotgun sequence (383 bp)
Overview 1 RT 1: 3-372 bp Neighborhood of RT #1 [3, 380] RVT-UG11 Feature: gene Location: 3-380 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 267-372 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 67-372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11

Seq: WUQY01000027.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_27, whole genome shotgun sequence (57144 bp)
Overview 1 RT 1: 20926-26087 bp Neighborhood of RT #1 [20926, 26176] RVT-UG28b VirE_N PriCT_2 COG4849 Feature: gene Location: 20926-21735 bp Feature: gene Location: 21796-22227 bp Feature: gene Location: 22401-24173 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 22845-23574 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 22845-23 574 bp Feature: gene Location: 24283-25308 bp Feature: domain Description: VirE_N Location: 24469-24844 bp Feature: domain Description: VirE_N Location: 24469-24844 bp Feature: domain Description: PriCT_2 Location: 25021-25249 bp Feature: domain Description: PriCT_2 Location: 25021-25249 bp Feature: gene Location: 25403-26176 bp Feature: domain Description: COG4849 Location: 25487-26087 bp Feature: domain Description: COG4849 Location: 25487-26087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707), COG4849 (Predicted nucleotidyltransferase )

Seq: WUQY01000003.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_3, whole genome shotgun sequence (207939 bp)
Overview 1 RT 1: 205254-207865 bp Neighborhood of RT #1 [205254, 207936] PRK00855 RVT-GII Feature: gene Location: 205254-205517 bp Feature: gene Location: 205591-206922 bp Feature: domain Description: PRK00855 Location: 205597-206851 bp Feature: domain Description: PRK00855 Location: 205597-206851 bp Feature: gene Location: 207559-207936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207754-207865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207754 -207865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00855 (argininosuccinate lyase; Provisional), RVT-GII

Seq: WUQY01000031.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_31, whole genome shotgun sequence (47866 bp)
Overview 1 RT 1: 44570-47716 bp Neighborhood of RT #1 [44570, 47730] IDH RVT-GII Feature: gene Location: 44570-46783 bp Feature: domain Description: IDH Location: 44582-46772 bp Feature: domain Description: IDH Location: 445 82-46772 bp Feature: gene Location: 46855-46998 bp Feature: gene Location: 47359-47730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47599-47716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475 99-47716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IDH (pfam03971), RVT-GII

Seq: WUQY01000037.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_37, whole genome shotgun sequence (32444 bp)
Overview 1 RT 1: 20085-25942 bp Neighborhood of RT #1 [20085, 25965] ALDH_F4-17_P5CDH RVT-GII GIIM CcmA Feature: gene Location: 20085-21719 bp Feature: domain Description: ALDH_F4-17_P5CDH Location: 20121-21681 bp Feature: domain Description: ALDH_F4-17_P5CDH Location: 20121-216 81 bp Feature: gene Location: 21790-21933 bp Feature: gene Location: 22294-23610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22534-23161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22534-2316 1 bp Feature: domain Description: GIIM Note: maturase Location: 23218-23419 bp Feature: domain Description: GIIM Note: maturase Location: 23218-23419 bp Feature: gene Location: 23772-25250 bp Feature: gene Location: 25270-25965 bp Feature: domain Description: CcmA Location: 25276-25942 bp Feature: domain Description: CcmA Location: 25276 -25942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_F4-17_P5CDH (cd07123), RVT-GII, GIIM (pfam08388), CcmA (COG4133)

Seq: WUQY01000046.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_46, whole genome shotgun sequence (23704 bp)
Overview 1 RT 1: 10-8329 bp Neighborhood of RT #1 [10, 9933] SIR2-like LDcluster4 RVT-UG5 COG0610 DUF262 Feature: gene Location: 10-1377 bp Feature: domain Description: SIR2-like Location: 76-745 bp Feature: domain Description: SIR2-like Location: 7 6-7 45 bp Feature: domain Description: LDcluster4 Location: 847-1186 bp Feature: domain Description: LDcluster4 Location: 847 -1186 bp Feature: gene Location: 1586-2950 bp Feature: gene Location: 2947-4551 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3385-3898 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3385-3898 bp Feature: gene Location: 4567-7584 bp Feature: domain Description: COG0610 Location: 4753-7537 bp Feature: domain Description: COG0610 Location: 47 53-7 537 bp Feature: gene Location: 7597-9933 bp Feature: domain Description: DUF262 Location: 7621-8329 bp Feature: domain Description: DUF262 Location: 7 621-8329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2-like (cd01406), LDcluster4 (pfam18306), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF262 (pfam03235)

Seq: WUQY01000072.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_72, whole genome shotgun sequence (1846 bp)
Overview 1 RT 1: 93-1600 bp Neighborhood of RT #1 [93, 1767] RVT-GII GIIM Feature: gene Location: 93-296 bp Feature: gene Location: 454-1767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700-1318 bp Feature: domain Description: GIIM Note: maturase Location: 1381-1600 bp Feature: domain Description: GIIM Note: maturase Location: 138 1-1600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WUQY01000083.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_83, whole genome shotgun sequence (1054 bp)
Overview 1 RT 1: 2-776 bp Neighborhood of RT #1 [2, 973] RVT-GII GIIM Feature: gene Location: 2-973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-509 bp Feature: domain Description: GIIM Note: maturase Location: 566-776 bp Feature: domain Description: GIIM Note: maturase Location: 566-776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WUQY01000084.1 Sphingobacterium bovisgrunnientis strain KCTC 52685 scaffold_84, whole genome shotgun sequence (1031 bp)
Overview 1 RT 1: 2-1031 bp Neighborhood of RT #1 [2, 1030] RVT-GII GIIM Feature: gene Location: 2-1030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-824 bp Feature: domain Description: GIIM Note: maturase Location: 881-1031 bp Feature: domain Description: GIIM Note: maturase Location: 881-10 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)